| Sequence 1: | NP_001262343.1 | Gene: | rn / 40879 | FlyBaseID: | FBgn0267337 | Length: | 952 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001261387.1 | Gene: | CG12605 / 38468 | FlyBaseID: | FBgn0035481 | Length: | 619 | Species: | Drosophila melanogaster |
| Alignment Length: | 545 | Identity: | 120/545 - (22%) |
|---|---|---|---|
| Similarity: | 194/545 - (35%) | Gaps: | 173/545 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 167 WSTGNNNEVVSHSSNGHTNNHPTTPPTPPNEASATQATSVSAINLNQAQPASQTRSNFG------ 225
Fly 226 --SSIKSPPSEPDAVTAATCKSQENNSGQNPTPNSLSDHNPAHNLNSNSTAAAV----------A 278
Fly 279 AAAAAAAAANMP-------------------------IGGVQGQNPTQGLVHWMSAVMAEHMTGQ 318
Fly 319 THHDPGAVGMHYMWNGNVDHAKDI---------SDYNLW-PPTPRSHQHASEHHPMSLKQEYEAK 373
Fly 374 MNDHHHNNLQKGHFLDDNRLEHHAVTGQGGLGLGASNGVGGGGGGASVVGNSSLGASSHHAVAAA 438
Fly 439 HHHNQAVAAASAAALL-------VVPQP----INASKMGGPGGV----SSVAGGHATGGG----S 484
Fly 485 GRK---YQCKMCPQIFSSKADLQLHTQIH----MREAKPYKCTQCSKAFANSSYLSQHTRIHLGI 542
Fly 543 KPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNS 607
Fly 608 CYKCFSDEPSLLEHIPKHKESKHLK 632 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rn | NP_001262343.1 | C2H2 Zn finger | 490..510 | CDD:275368 | 5/19 (26%) |
| C2H2 Zn finger | 519..539 | CDD:275368 | 6/19 (32%) | ||
| zf-H2C2_2 | 531..556 | CDD:290200 | 7/24 (29%) | ||
| zf-C2H2 | 545..567 | CDD:278523 | 8/21 (38%) | ||
| C2H2 Zn finger | 547..567 | CDD:275368 | 8/19 (42%) | ||
| zf-C2H2_8 | 550..630 | CDD:292531 | 36/79 (46%) | ||
| zf-H2C2_2 | 559..586 | CDD:290200 | 16/26 (62%) | ||
| C2H2 Zn finger | 575..597 | CDD:275368 | 10/21 (48%) | ||
| C2H2 Zn finger | 605..625 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 636..656 | CDD:275368 | |||
| CG12605 | NP_001261387.1 | zf-C2H2 | 439..461 | CDD:278523 | 6/21 (29%) |
| C2H2 Zn finger | 441..461 | CDD:275370 | 5/19 (26%) | ||
| C2H2 Zn finger | 472..492 | CDD:275368 | 6/19 (32%) | ||
| COG5048 | 492..>570 | CDD:227381 | 35/85 (41%) | ||
| zf-C2H2 | 496..518 | CDD:278523 | 8/21 (38%) | ||
| C2H2 Zn finger | 498..518 | CDD:275368 | 8/19 (42%) | ||
| zf-H2C2_2 | 511..534 | CDD:290200 | 15/24 (63%) | ||
| zf-C2H2 | 524..546 | CDD:278523 | 11/23 (48%) | ||
| C2H2 Zn finger | 526..546 | CDD:275368 | 10/21 (48%) | ||
| zf-H2C2_2 | 538..562 | CDD:290200 | 12/27 (44%) | ||
| C2H2 Zn finger | 554..571 | CDD:275368 | 6/20 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR23226 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||