DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and ZNF892

DIOPT Version :10

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001382890.1 Gene:ZNF892 / 344065 HGNCID:38707 Length:522 Species:Homo sapiens


Alignment Length:226 Identity:85/226 - (37%)
Similarity:123/226 - (54%) Gaps:28/226 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 SGRK-YQCKMCPQIFSSKADLQLHTQIHMREAKPYKCTQCSKAFANSSYLSQHTRIHLGIKPYRC 547
            :|.| |:|..|.:.|:..:.|..|.:||..| |||:|.:|.|||:.|::|:||..||.|.|||:|
Human   300 TGEKPYECNECGKAFNQSSYLTQHQRIHTGE-KPYECNECGKAFSQSTFLTQHQVIHTGEKPYKC 363

  Fly   548 EICQRKFTQLSHLQQHIRTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCF 612
            ..|.:.|:..|.|.||.|||||::||:|..  |.|||...|.|..|.|.|..:||:|||.|.|.|
Human   364 NECGKAFSDRSGLIQHQRTHTGERPYECNE--CGKAFGYCSALTQHQRTHTGEKPYKCNDCAKAF 426

  Fly   613 SDEPSLLEHIPKHKESKHLKTHICQYCGKSYTQETYLTKHMQKHAERTDKRPPIVPGSAAAIAAA 677
            ||..:|:.|...|...|..|   |:.|||:::|.:.||||.:.|   |.::|........|.:.:
Human   427 SDRSALIRHQRTHTGEKPYK---CKDCGKAFSQSSSLTKHQKTH---TGEKPYKCKECGKAFSQS 485

  Fly   678 AAAAAGGSANPANGPPPPPNPAQHQRNNLGL 708
            ::.                  :|||:.:.|:
Human   486 SSL------------------SQHQKTHAGV 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368 5/19 (26%)
C2H2 Zn finger 519..539 CDD:275368 9/19 (47%)
COG5048 543..>647 CDD:227381 47/103 (46%)
C2H2 Zn finger 547..567 CDD:275368 8/19 (42%)
zf-H2C2_2 559..586 CDD:463886 15/26 (58%)
C2H2 Zn finger 575..597 CDD:275368 9/21 (43%)
C2H2 Zn finger 605..625 CDD:275368 9/19 (47%)
C2H2 Zn finger 636..656 CDD:275368 9/19 (47%)
ZNF892NP_001382890.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..124
C2H2 Zn finger 223..243 CDD:275368
COG5048 <247..399 CDD:227381 47/101 (47%)
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
C2H2 Zn finger 391..411 CDD:275368 9/21 (43%)
zf-H2C2_2 403..427 CDD:463886 11/23 (48%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
zf-H2C2_2 431..456 CDD:463886 9/27 (33%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
zf-H2C2_2 459..482 CDD:463886 7/25 (28%)
C2H2 Zn finger 500..520 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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