DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and ZSCAN22

DIOPT Version :9

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001308045.1 Gene:ZSCAN22 / 342945 HGNCID:4929 Length:491 Species:Homo sapiens


Alignment Length:198 Identity:78/198 - (39%)
Similarity:110/198 - (55%) Gaps:6/198 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 PINASKMGGPGGVSSVAGGHATGGGSGRKYQCKMCPQIFSSKADLQLHTQIHMREAKPYKCTQCS 523
            |...|:.|.....|:....|.......:.::||.|.:.||....|..|.:||..| |||||.:|.
Human   295 PYACSECGKAFSRSTHLAQHQVVHTGAKPHECKECGKAFSRVTHLTQHQRIHTGE-KPYKCGECG 358

  Fly   524 KAFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHPGCQKAFSQLS 588
            |.|:.|::|:||.|:|.|.:||.|:.|.:.|:|.:||.||.|.|||:|||||  ..|.:|||..|
Human   359 KTFSRSTHLTQHQRVHTGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKC--DACGRAFSDCS 421

  Fly   589 NLQSHSRCHQTDKPFKCNSCYKCFSDEPSLLEHIPKHKESKHLKTHICQYCGKSYTQETYLTKHM 653
            .|..|.|.|..:||::|..|.|.|:...||:||...|...|..|   |..|||::::.:.|..|:
Human   422 ALIRHLRIHSGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYK---CSDCGKAFSRSSALMVHL 483

  Fly   654 QKH 656
            :.|
Human   484 RIH 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368 7/19 (37%)
C2H2 Zn finger 519..539 CDD:275368 9/19 (47%)
zf-H2C2_2 531..556 CDD:290200 11/24 (46%)
zf-C2H2 545..567 CDD:278523 10/21 (48%)
C2H2 Zn finger 547..567 CDD:275368 9/19 (47%)
zf-C2H2_8 550..630 CDD:292531 36/79 (46%)
zf-H2C2_2 559..586 CDD:290200 16/26 (62%)
C2H2 Zn finger 575..597 CDD:275368 9/21 (43%)
C2H2 Zn finger 605..625 CDD:275368 8/19 (42%)
C2H2 Zn finger 636..656 CDD:275368 6/19 (32%)
ZSCAN22NP_001308045.1 SCAN 45..133 CDD:307924
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..161
COG5048 <174..482 CDD:227381 76/192 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..249
C2H2 Zn finger 270..290 CDD:275368
C2H2 Zn finger 298..318 CDD:275368 4/19 (21%)
C2H2 Zn finger 326..346 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..374 CDD:275368 9/19 (47%)
C2H2 Zn finger 382..402 CDD:275368 9/19 (47%)
C2H2 Zn finger 410..430 CDD:275368 9/21 (43%)
C2H2 Zn finger 438..458 CDD:275368 8/19 (42%)
C2H2 Zn finger 466..486 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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