Sequence 1: | NP_001262343.1 | Gene: | rn / 40879 | FlyBaseID: | FBgn0267337 | Length: | 952 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_496545.1 | Gene: | lin-29 / 174830 | WormBaseID: | WBGene00003015 | Length: | 459 | Species: | Caenorhabditis elegans |
Alignment Length: | 520 | Identity: | 198/520 - (38%) |
---|---|---|---|
Similarity: | 241/520 - (46%) | Gaps: | 129/520 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 399 TGQGG---LGLGASNGVGGGGGGASVVGNSSL-GASS------------HHAVA------AAHHH 441
Fly 442 NQAVAAASA--------AALLVVPQPINASKMGGPGGVSSVAGGHATGGGSGRKYQCKMCPQIFS 498
Fly 499 SKADL-QLHTQIHMREAKPYKCTQCSKAFANSSYLSQHTRIHLGIKPY-RCEICQRKFTQLSHLQ 561
Fly 562 QHIRTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEPSLLEHIPKHK 626
Fly 627 ESKHLKTHICQYCGKSYTQETYLTKHMQKHAERTDKRPPIVPGSAAAIAAAAAAAAGGSANPANG 691
Fly 692 PPPPP----NPAQHQRNNLGLPPVSIAPSDNGYWPKVSPDSAAAANAMEVMHQQQQQQQQQQQQQ 752
Fly 753 QQQQQQQQQQAHHHHP---QHG--VPPQQHVPPQQQQQQQQQQQHHHPQQQPPPQHSMEAHYAQP 812
Fly 813 TAPNGSQSNGHGAELQPHHRMPDPVREDIASTPSAVGPYDAASITKTTSNSAFTP---INSMPPH 874
Fly 875 874 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rn | NP_001262343.1 | C2H2 Zn finger | 490..510 | CDD:275368 | 7/20 (35%) |
C2H2 Zn finger | 519..539 | CDD:275368 | 17/19 (89%) | ||
zf-H2C2_2 | 531..556 | CDD:290200 | 17/25 (68%) | ||
zf-C2H2 | 545..567 | CDD:278523 | 15/22 (68%) | ||
C2H2 Zn finger | 547..567 | CDD:275368 | 15/19 (79%) | ||
zf-C2H2_8 | 550..630 | CDD:292531 | 69/79 (87%) | ||
zf-H2C2_2 | 559..586 | CDD:290200 | 21/26 (81%) | ||
C2H2 Zn finger | 575..597 | CDD:275368 | 17/21 (81%) | ||
C2H2 Zn finger | 605..625 | CDD:275368 | 16/19 (84%) | ||
C2H2 Zn finger | 636..656 | CDD:275368 | 14/19 (74%) | ||
lin-29 | NP_496545.1 | zf-C2H2 | 151..173 | CDD:278523 | 19/21 (90%) |
C2H2 Zn finger | 153..173 | CDD:275368 | 17/19 (89%) | ||
zf-H2C2_2 | 165..191 | CDD:290200 | 17/25 (68%) | ||
zf-C2H2_8 | 181..265 | CDD:292531 | 70/83 (84%) | ||
C2H2 Zn finger | 182..202 | CDD:275368 | 15/19 (79%) | ||
zf-C2H2 | 182..202 | CDD:278523 | 15/19 (79%) | ||
zf-H2C2_2 | 194..221 | CDD:290200 | 21/26 (81%) | ||
C2H2 Zn finger | 210..232 | CDD:275368 | 17/21 (81%) | ||
zf-H2C2_2 | 224..248 | CDD:290200 | 23/23 (100%) | ||
C2H2 Zn finger | 240..269 | CDD:275368 | 25/28 (89%) | ||
zf-C2H2 | 269..291 | CDD:278523 | 16/21 (76%) | ||
C2H2 Zn finger | 271..291 | CDD:275368 | 14/19 (74%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 83 | 1.000 | Domainoid score | I5338 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003260 | |
OrthoInspector | 1 | 1.000 | - | - | oto18030 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3082 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.940 |