DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rn and ZNF384

DIOPT Version :9

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001372672.1 Gene:ZNF384 / 171017 HGNCID:11955 Length:608 Species:Homo sapiens


Alignment Length:740 Identity:210/740 - (28%)
Similarity:294/740 - (39%) Gaps:187/740 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NNNGYSWS-----TGN----------NNEVVSHSSNGHTNNHPTTPPTPPNEASATQATSV-SAI 209
            |:|.|.|.     :|.          .::::.....|....|..|..|.|...|.....|: :..
Human     7 NSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLPSGISMDTES 71

  Fly   210 NLNQAQPASQTRSNFGSSIKSPPSEPDAVTAATCKSQENNSGQNPTPNSLSDHNPAHNLNSNSTA 274
            ..:|..|.||.......::...||........:|..:....|.......|...:|:.:|.:.:::
Human    72 KSDQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSGSLVTTASS 136

  Fly   275 AAVAAAAAAAAAANMPIGGVQGQNPTQGLVHWMSAVMAEHMTGQTHHDPGAVGMHYMWNGNVDHA 339
            |.....:|....:.:|.|....|     :|..:|..:|..:|.:.....|..|            
Human   137 AQTFPISAPMIVSALPPGSQALQ-----VVPDLSKKVASTLTEEGGGGGGGGG------------ 184

  Fly   340 KDISDYNLWPPTPRSHQHASEHHPMSLKQEYEA---KMNDHHHNNLQKGHFLDDNRLEHHAVTGQ 401
                  ::.|..||..:.         |:..|:   :|||.:..:.:..   ||::.:......:
Human   185 ------SVAPKPPRGRKK---------KRMLESGLPEMNDPYVLSPEDD---DDHQKDGKTYRSE 231

  Fly   402 GGLGLGASNGVGGGGGGASVVGNSS---------LGASSHHAVAAAHHHNQAVAAASAAALLVVP 457
            |..|.|....:|...   ||.|:::         :.:.:.::.:....|:::....         
Human   232 GNCGTGNGQSLGLMD---SVPGSTTNLLCDPGCRMCSLTFYSKSEMQIHSKSHTET--------- 284

  Fly   458 QPINASKMGGPGGVSSVAGGHATGGGSGRKYQCKMCPQIFSSKADLQLHTQIHMR----EAKPYK 518
            :|............||....|.......:.|.|..|.:.|...:.||.||:||.:    ..||:|
Human   285 KPHKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHK 349

  Fly   519 CTQCSKAFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHPGCQKA 583
            |..|||.|||:|||:||.|||.|.|||.|..||:.|.||||||||.|.||||:||||.||||:||
Human   350 CPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDRPYKCAHPGCEKA 414

  Fly   584 FSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEPSLLEHIPKHKESKHLKTHICQYCGKSYTQETY 648
            |:||||||||.|.|..||||||::|::.::|..||..|:..| ..||.|.:.|..|.::||.|||
Human   415 FTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEVHLSTH-TVKHAKVYTCTICSRAYTSETY 478

  Fly   649 LTKHMQKHAERTDKRPPIVPGSAAAIAAAAAAAAGGSANPANGPPPPPNPAQHQRNNLGLPPVSI 713
            |.|||:||      .||.:.....|.|||||.|                                
Human   479 LMKHMRKH------NPPDLQQQVQAAAAAAAVA-------------------------------- 505

  Fly   714 APSDNGYWPKVSPDSAAAANAMEVMHQQQQQQQQQQQQQQQQQQQQQQQAHHHHPQHGVPPQQHV 778
                                        |.|.|.|.|.|.|.|.|.|.||.....|         
Human   506 ----------------------------QAQAQAQAQAQAQAQAQAQAQASQASQQ--------- 533

  Fly   779 PPQQQQQQQQQQQHHHPQQQPPPQHSMEAHYAQP-TAPNGSQSNGHGAELQPHHRMPDPVREDIA 842
              |||||||||||    ||||||      |:..| .||.|    |.|.:..|:   |.|      
Human   534 --QQQQQQQQQQQ----QQQPPP------HFQSPGAAPQG----GGGGDSNPN---PPP------ 573

  Fly   843 STPSAVGPYDAAS------ITKTTS 861
            .....:.||..|.      :|.|||
Human   574 QCSFDLTPYKTAEHHKDICLTVTTS 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368 7/19 (37%)
C2H2 Zn finger 519..539 CDD:275368 13/19 (68%)
zf-H2C2_2 531..556 CDD:290200 15/24 (63%)
zf-C2H2 545..567 CDD:278523 14/21 (67%)
C2H2 Zn finger 547..567 CDD:275368 13/19 (68%)
zf-C2H2_8 550..630 CDD:292531 49/79 (62%)
zf-H2C2_2 559..586 CDD:290200 21/26 (81%)
C2H2 Zn finger 575..597 CDD:275368 17/21 (81%)
C2H2 Zn finger 605..625 CDD:275368 6/19 (32%)
C2H2 Zn finger 636..656 CDD:275368 11/19 (58%)
ZNF384NP_001372672.1 C2H2 Zn finger 261..281 CDD:275368 1/19 (5%)
COG5048 <284..486 CDD:227381 100/211 (47%)
C2H2 Zn finger 289..309 CDD:275368 3/19 (16%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 13/19 (68%)
C2H2 Zn finger 378..398 CDD:275368 13/19 (68%)
C2H2 Zn finger 406..428 CDD:275368 17/21 (81%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
C2H2 Zn finger 466..486 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40954
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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