DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and ZNF846

DIOPT Version :10

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001071092.1 Gene:ZNF846 / 162993 HGNCID:27260 Length:533 Species:Homo sapiens


Alignment Length:242 Identity:90/242 - (37%)
Similarity:121/242 - (50%) Gaps:59/242 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   478 HATGGG---SGRK-YQCKMCPQIFSSKADLQLHTQIHMREAKPYKCTQCSKAFANSSYLSQHTRI 538
            |..|.|   ||.| |.||.|.:.|:....|:||.:.|..| |||||.:|.|||.:||||:.||||
Human   240 HLIGHGRIHSGEKPYVCKECGKAFTQSTGLKLHIRTHSGE-KPYKCKECGKAFTHSSYLTDHTRI 303

  Fly   539 HLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCR------------------HPG------ 579
            |.|.|||.|..|.:.||:.:.|..|:|.|||:|||:|:                  |.|      
Human   304 HSGKKPYVCMECGKAFTRSTGLILHMRIHTGEKPYECKECGKAFIHSSYLTKHVRIHSGEKLYLC 368

  Fly   580 --CQKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEPSLLEHIPKH--------KE------- 627
              |.|||::.|.|..|.|.|..:||::|..|.|.|::...|.:|:..|        ||       
Human   369 KACGKAFTRSSGLVLHMRTHTGEKPYECKECGKAFNNSSMLSQHVRIHTGEKPYECKECGKAFTQ 433

  Fly   628 ----SKHLKTHI------CQYCGKSYTQETYLTKHMQKHAERTDKRP 664
                |.||:||.      |:.|||::.:.|.|..||:.|   |.::|
Human   434 SSGLSTHLRTHTGEKACECKECGKAFARSTNLNMHMRTH---TGEKP 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368 7/19 (37%)
C2H2 Zn finger 519..539 CDD:275368 12/19 (63%)
COG5048 543..>647 CDD:227381 48/154 (31%)
C2H2 Zn finger 547..567 CDD:275368 7/19 (37%)
zf-H2C2_2 559..586 CDD:463886 16/52 (31%)
C2H2 Zn finger 575..597 CDD:275368 11/47 (23%)
C2H2 Zn finger 605..625 CDD:275368 6/19 (32%)
C2H2 Zn finger 636..656 CDD:275368 8/19 (42%)
ZNF846NP_001071092.1 KRAB 8..67 CDD:214630
COG5048 106..496 CDD:227381 90/242 (37%)
C2H2 Zn finger 120..136 CDD:275368
C2H2 Zn finger 200..220 CDD:275368
C2H2 Zn finger 228..248 CDD:275368 3/7 (43%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
C2H2 Zn finger 284..304 CDD:275368 12/19 (63%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 1/19 (5%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 396..416 CDD:275368 6/19 (32%)
C2H2 Zn finger 424..444 CDD:275368 5/19 (26%)
C2H2 Zn finger 452..472 CDD:275368 8/19 (42%)
C2H2 Zn finger 480..500 CDD:275368
zf-H2C2_2 492..517 CDD:463886
C2H2 Zn finger 508..527 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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