DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and ZNF197

DIOPT Version :10

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_008922.1 Gene:ZNF197 / 10168 HGNCID:12988 Length:1029 Species:Homo sapiens


Alignment Length:559 Identity:142/559 - (25%)
Similarity:201/559 - (35%) Gaps:152/559 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 AVVEDYALGLDCPV---------EHTFRKPHNNNGYSWSTGNNNEVVSHSSNGHTNNHPTTPPTP 194
            |:||:....||.|.         :.|.:|                |||....       |.||..
Human   115 ALVEELQKDLDGPAIQVPVLVKDQDTLQK----------------VVSAPGT-------TLPPVL 156

  Fly   195 PNEASATQ-----ATSVSAINLNQAQPASQTRSNFGSSIKSPPSEPDAVTAATCKSQENNSGQNP 254
            |....|.:     .|.:.|.||...|.            .||..|..|:      |||.|.....
Human   157 PGSHIAAEICPHPPTDLVAFNLQDPQH------------DSPAPEASAL------SQEENPRNQL 203

  Fly   255 TPNSLSDHNPAHNLNSNSTAAAVAAAAAAAAAANMPIGGVQGQNPTQGLVHWMSAVMAEHMTGQT 319
            ....|....|...:.....:....:...|..            .|.|..::|  .||.|:....|
Human   204 MALMLLTAQPQELVMFEEVSVCFTSEEWACL------------GPIQRALYW--DVMLENYGNVT 254

  Fly   320 HHDPGAVGMHYMWNGNVDHAKDISDYNLWPPTPRSHQHASEHH----------PMSLKQEYEAKM 374
            ..:         |....::.:..|       .|.|.|.|..|.          |..|..|.|.:.
Human   255 SLE---------WETMTENEEVTS-------KPSSSQRADSHKGTSKRLQGSVPQVLDFEEECEW 303

  Fly   375 ----------NDHHHNNLQKGHFL--DDNRLEHHAVTGQGGLGLGASNGVGGGGGGASVVGNSSL 427
                      .|...:.::|....  |..:.......||....||.|...|      |.:..|.:
Human   304 QVLASQWGNETDERADTVKKVSLCERDKKKRTPPEKQGQKWKELGDSLTFG------SAISESLI 362

  Fly   428 GASS---HHAVAAAHHHNQAVAAASAAALLVVPQPINASKMGGPGGVSSVAGGHATGGGSGRK-Y 488
            |...   :.......|.|:            :...||..::            |     :|.| :
Human   363 GTEGKKFYKCDMCCKHFNK------------ISHLINHRRI------------H-----TGEKPH 398

  Fly   489 QCKMCPQIFSSKADLQLHTQIHMREAKPYKCTQCSKAFANSSYLSQHTRIHLGIKPYRCEICQRK 553
            :||.|.:.|..::.|.:|.:.|..| |||||.:|.|||:.|:||..|.|||.|.|||:|:.|.:.
Human   399 KCKECGKGFIQRSSLLMHLRNHSGE-KPYKCNECGKAFSQSAYLLNHQRIHTGEKPYKCKECGKG 462

  Fly   554 FTQLSHLQQHIRTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEPSL 618
            |.:.|.|..|:|.|:|::||||..  |.|.|||.:.|..|.|.|:.::|:|||.|.|.|..:.||
Human   463 FYRHSGLIIHLRRHSGERPYKCNE--CGKVFSQNAYLIDHQRLHKGEEPYKCNKCQKAFILKKSL 525

  Fly   619 LEHIPKHKESKHLKTHICQYCGKSYTQETYLTKHMQKHA 657
            :.|...|...|..|   |..|||::.|.|||..|.:.|:
Human   526 ILHQRIHSGEKPYK---CDECGKTFAQTTYLIDHQRLHS 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368 6/19 (32%)
C2H2 Zn finger 519..539 CDD:275368 10/19 (53%)
COG5048 543..>647 CDD:227381 43/103 (42%)
C2H2 Zn finger 547..567 CDD:275368 7/19 (37%)
zf-H2C2_2 559..586 CDD:463886 12/26 (46%)
C2H2 Zn finger 575..597 CDD:275368 9/21 (43%)
C2H2 Zn finger 605..625 CDD:275368 8/19 (42%)
C2H2 Zn finger 636..656 CDD:275368 9/19 (47%)
ZNF197NP_008922.1 SCAN 38..150 CDD:128708 11/50 (22%)
KRAB 216..256 CDD:460171 8/53 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..290 6/34 (18%)
C2H2 Zn finger 372..392 CDD:275368 4/43 (9%)
zf-H2C2_2 384..409 CDD:463886 9/41 (22%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
COG5048 424..853 CDD:227381 65/143 (45%)
C2H2 Zn finger 428..448 CDD:275368 10/19 (53%)
C2H2 Zn finger 456..476 CDD:275368 7/19 (37%)
C2H2 Zn finger 484..504 CDD:275368 9/21 (43%)
C2H2 Zn finger 512..532 CDD:275368 8/19 (42%)
C2H2 Zn finger 540..560 CDD:275368 9/19 (47%)
C2H2 Zn finger 568..588 CDD:275368
C2H2 Zn finger 596..616 CDD:275368
C2H2 Zn finger 624..644 CDD:275368
C2H2 Zn finger 652..672 CDD:275368
C2H2 Zn finger 680..700 CDD:275368
C2H2 Zn finger 708..728 CDD:275368
C2H2 Zn finger 736..756 CDD:275368
COG5048 760..>1026 CDD:227381
C2H2 Zn finger 764..784 CDD:275368
C2H2 Zn finger 792..812 CDD:275368
C2H2 Zn finger 820..840 CDD:275368
C2H2 Zn finger 848..868 CDD:275368
C2H2 Zn finger 876..896 CDD:275368
C2H2 Zn finger 904..924 CDD:275368
C2H2 Zn finger 932..952 CDD:275368
C2H2 Zn finger 960..980 CDD:275368
C2H2 Zn finger 988..1008 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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