| Sequence 1: | NP_001262343.1 | Gene: | rn / 40879 | FlyBaseID: | FBgn0267337 | Length: | 952 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_047293222.1 | Gene: | ZSCAN30 / 100101467 | HGNCID: | 33517 | Length: | 601 | Species: | Homo sapiens |
| Alignment Length: | 171 | Identity: | 72/171 - (42%) |
|---|---|---|---|
| Similarity: | 96/171 - (56%) | Gaps: | 6/171 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 486 RKYQCKMCPQIFSSKADLQLHTQIHMREAKPYKCTQCSKAFANSSYLSQHTRIHLGIKPYRCEIC 550
Fly 551 QRKFTQLSHLQQHIRTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDE 615
Fly 616 PSLLEHIPKHKESKHLKTHICQYCGKSYTQETYLTKHMQKH 656 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rn | NP_001262343.1 | C2H2 Zn finger | 490..510 | CDD:275368 | 8/19 (42%) |
| C2H2 Zn finger | 519..539 | CDD:275368 | 10/19 (53%) | ||
| COG5048 | 543..>647 | CDD:227381 | 40/103 (39%) | ||
| C2H2 Zn finger | 547..567 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 559..586 | CDD:463886 | 14/26 (54%) | ||
| C2H2 Zn finger | 575..597 | CDD:275368 | 9/21 (43%) | ||
| C2H2 Zn finger | 605..625 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 636..656 | CDD:275368 | 5/19 (26%) | ||
| ZSCAN30 | XP_047293222.1 | SCAN | 151..261 | CDD:128708 | |
| COG5048 | 388..>467 | CDD:227381 | 16/33 (48%) | ||
| C2H2 Zn finger | 410..430 | CDD:275368 | |||
| COG5048 | <435..586 | CDD:227381 | 68/156 (44%) | ||
| C2H2 Zn finger | 438..458 | CDD:275368 | 8/19 (42%) | ||
| C2H2 Zn finger | 466..486 | CDD:275368 | 10/19 (53%) | ||
| C2H2 Zn finger | 494..514 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 522..542 | CDD:275368 | 9/21 (43%) | ||
| C2H2 Zn finger | 550..570 | CDD:275368 | 7/19 (37%) | ||
| zf-C2H2 | 576..598 | CDD:395048 | 5/21 (24%) | ||
| C2H2 Zn finger | 578..598 | CDD:275368 | 5/19 (26%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||