DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and SYTL5

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001156806.1 Gene:SYTL5 / 94122 HGNCID:15589 Length:752 Species:Homo sapiens


Alignment Length:529 Identity:119/529 - (22%)
Similarity:188/529 - (35%) Gaps:166/529 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RRPTAVRSPSGQPPHYLKKSPSPTG-------GKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPA 116
            |.|.:.|| :|..|. .:.||:|:.       .::.|..:.|...:....:|...|         
Human   246 RTPKSSRS-NGVTPG-TQSSPAPSTRTVTSVISREYGFENSMDLAAIEGTSQELTK--------- 299

  Fly   117 QHAEQQNGNQLTVVDGNGLKHSLHNS---LHHSPVE------TIANGSVTITLDDHSLTNGKE-- 170
            .|....:|.....|.|..|......|   |..|..|      :|.:.||...||..||...:|  
Human   300 SHRRNTSGTPSIAVSGTSLSSDQSRSELDLSESFTEDSEDTVSIRSKSVPGALDKDSLEETEESI 364

  Fly   171 ---------------------------------LTVTD-------------------QYGKL--- 180
                                             |.|.|                   .||.:   
Human   365 DALVSSQLSTNTHRLASGLSTSSQAGSDRKWTYLNVPDADSDTTSLNSMMSVYSETGDYGNVKVS 429

  Fly   181 GTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDK--Q 243
            |.|...:.|..:...|.:.:..||.|       ..||       ..:..||.|||..|||||  .
Human   430 GEILLHISYCYKTGGLYIFVKNCRNL-------AIGD-------EKKQRTDAYVKSYLLPDKSRN 480

  Fly   244 HKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGD 308
            :|.||: :|...||.::|... |.::...|:..:|...:..:||:.|:..:|||..|..|....:
Human   481 NKRKTK-IRTGTNPEFNETLK-YTISHTQLETRTLQLSVWHYDRFGRNSFLGEVEIPFDSWNFEN 543

  Fly   309 ISKE--ALSISKEIQPRSLKIRAQGRGELLISLCWQP---------------------------- 343
            .:.|  .|....|..|   .|..|.:|||.:.|.:.|                            
Human   544 PTDEWFVLQPKVEFAP---DIGLQYKGELTVVLRYIPPEENLMLPPEQLQGNKTFKKGKKKESPV 605

  Fly   344 -AAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIP 407
             :.|.|.|.:.:|:||..:...|.:|.:||.|||.:..:..|.||.|.|::::|.:|.:|.|   
Human   606 ISGGILEVFIKEAKNLTAVKSGGTSDSFVKGYLLPDDSKATKHKTLVIKKSVNPQWNHTFMF--- 667

  Fly   408 AAEGAG---ASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNH--------------- 454
                :|   ..::.|.|||.:.|.:..:.|..:|.:.|    :|.:.::|               
Human   668 ----SGIHPQDIKNVCLELTIWDKEAFSSNIFLGGVRL----NSGSGVSHGKNVDWMDSQGEEQR 724

  Fly   455 -WNEVCNSP 462
             |.::.|:|
Human   725 LWQKMANNP 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 40/149 (27%)
C2B_Synaptotagmin-4 332..473 CDD:176049 41/179 (23%)
SYTL5NP_001156806.1 PHD_SF 11..123 CDD:328929
FYVE_Slp5 62..108 CDD:277305
CEP170_C <159..>309 CDD:317681 15/73 (21%)
C2A_SLP-4_5 429..552 CDD:175995 38/138 (28%)
C2B_SLP_1-2-3-4 566..744 CDD:175987 41/179 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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