DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and SYT8

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_011518757.1 Gene:SYT8 / 90019 HGNCID:19264 Length:539 Species:Homo sapiens


Alignment Length:486 Identity:121/486 - (24%)
Similarity:187/486 - (38%) Gaps:165/486 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IPDASVMDTIVP---AILGLTAAAV-----LSSVACICARQMRLRNKKQSQHDASFPFQPTRRPT 62
            |||. |..|..|   .|.|..||.|     |...||.|.|:.|                      
Human   175 IPDL-VAGTPWPRWALIAGALAAGVLLVSCLLCAACCCCRRHR---------------------- 216

  Fly    63 AVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQL 127
                         ||   |...:.:||.| .:..:|:.:.||:|...|...|.||          
Human   217 -------------KK---PRDKESVGLGS-ARGTTTTHLVQPDVDGLESSPGDAQ---------- 254

  Fly   128 TVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAE 192
                                                               :.|.:...|.:   
Human   255 ---------------------------------------------------QWGCLQLSLEF--- 265

  Fly   193 RNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAA-------TDPYVKLQLLPDKQHKVKTRV 250
                               ..|:.:|..|:.   |||       .|||.::.:.....|:.:|:|
Human   266 -------------------DFGSQEIRVGLR---QAADLRPGGTVDPYARVSVSTQAGHRHETKV 308

  Fly   251 VRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKE--A 313
            .|.|..||:||...|: :...:|...:|...:.:|.|:|..:.:||:..||.::::..:.:.  .
Human   309 HRGTLCPVFDETCCFH-IPQAELPGATLQVQLFNFKRFSGHEPLGELRLPLGTVDLQHVLEHWYL 372

  Fly   314 LSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYN 378
            |......||..:       |||..||.:.|::||||||:|:||.|.    .|||:||||:.|:.|
Human   373 LGPPAATQPEQV-------GELCFSLRYVPSSGRLTVVVLEARGLR----PGLAEPYVKVQLMLN 426

  Fly   379 GQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDR--VTKNEVIGRLE 441
            .::..|:||..||.|.:|.|||:|.|.:|.::..       :::|:|..|||  ..:.|.:|::.
Human   427 QRKWKKRKTATKKGTAAPYFNEAFTFLVPFSQVQ-------NVDLVLAVWDRSLPLRTEPVGKVH 484

  Fly   442 LGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            ||. .:|...|.||.::....||.||:.|.|
Human   485 LGA-RASGQPLQHWADMLAHARRPIAQRHPL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 31/151 (21%)
C2B_Synaptotagmin-4 332..473 CDD:176049 57/143 (40%)
SYT8XP_011518757.1 C2 257..370 CDD:301316 30/138 (22%)
C2 385..514 CDD:301316 56/140 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.820

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