DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and Sytl3

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_113572.1 Gene:Sytl3 / 83672 MGIID:1933367 Length:607 Species:Mus musculus


Alignment Length:466 Identity:110/466 - (23%)
Similarity:173/466 - (37%) Gaps:127/466 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RQMRLRNKKQSQHDASFPFQPTRRPTAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPI 101
            ||.....:::||.|           |||...|       :|:.:|      .:|.....:.....
Mouse   218 RQCVGHTERRSQSD-----------TAVNVTS-------RKASTP------DILKAFHQEDPKHP 258

  Fly   102 AQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSPVE--TIANGSVTITLDDHS 164
            ..|.:|.......|...|          |...||:|....|::.:..|  ...|.:||       
Mouse   259 PDPVLKQDTPPSSPTHSA----------VFSGGLRHGSLISINSTCTEMGNFDNANVT------- 306

  Fly   165 LTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAA 229
                            |.|.|.:.|..:..:|.:.|..|:.|              ......:..
Mouse   307 ----------------GEIEFAIHYCVKSCSLEICIKTCKNL--------------AYGEEKKRK 341

  Fly   230 TDPYVKLQLLPDK--QHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDD 292
            .:||||..||||:  |.|.||||.:||.:|.::|... |.::...|....|...:......:|..
Mouse   342 CNPYVKTYLLPDRSSQGKRKTRVQKNTLDPTFEETLK-YQVDPGQLMTRRLQVSVWHLGTLARRV 405

  Fly   293 VIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRA--------QGRGELLI-SLCWQPAA--- 345
            .:|||:.||...:..|      |.::..:...|:.:|        |..|||.: :....||.   
Mouse   406 FLGEVILPLAMWDFKD------STAQNARWYPLRAKAEKYEENIPQNNGELAVRAKLVLPAGPRK 464

  Fly   346 ------------GRLTVVLLKARNLP-RMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPV 397
                        |:|.:|:|.|:||| |.|  |..:.:||..|....|:..:.|:.|.|:...|.
Mouse   465 PQEAQEGQLALNGQLCLVVLGAKNLPVRSD--GTLNSFVKGCLTLPNQQKLRVKSPVLKKQACPQ 527

  Fly   398 FNESFAFDIPAAEGAGAS-LEGVSLELMLLDWDRV---TKNEVIGRLELGG-------PNSSSTA 451
            :..||.|:     |..:| |...:|||.:  ||:.   ..:.::|...||.       |:|.|.:
Mouse   528 WKHSFVFN-----GVSSSQLRQSTLELTV--WDQAIFGMNDRLLGEARLGSKGGAAGCPDSGSQS 585

  Fly   452 LNHWNEVCNSP 462
            ...|:.|.:||
Mouse   586 KLQWHRVLSSP 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 37/144 (26%)
C2B_Synaptotagmin-4 332..473 CDD:176049 45/159 (28%)
Sytl3NP_113572.1 PHD_SF 14..123 CDD:473978
FYVE_like_SF 60..108 CDD:333710
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..279 15/91 (16%)
C2 306..433 CDD:472691 38/170 (22%)
C2B_SLP_1-2-3-4 447..607 CDD:175987 45/159 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.