DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and FTIP1

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_568175.2 Gene:FTIP1 / 830576 AraportID:AT5G06850 Length:794 Species:Arabidopsis thaliana


Alignment Length:319 Identity:60/319 - (18%)
Similarity:126/319 - (39%) Gaps:89/319 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYD 260
            |.|.:::.:.||..         |...|      .||||::::   ..:|.||:......||.::
plant    56 LYVRVVKAKDLPPN---------PVTSN------CDPYVEVKI---GNYKGKTKHFEKRTNPEWN 102

  Fly   261 EDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSL 325
            :.|.|   :.:.:|:.::...:...:..:||:.||:||..:..:      ...:.....:.|:..
plant   103 QVFAF---SKDKVQSSTVEVFVRDKEMVTRDEYIGKVVFDMREV------PTRVPPDSPLAPQWY 158

  Fly   326 KI-----RAQGRGELLISL------------CW---------------------QPAAGRLTVVL 352
            ::     .::.|||:::::            .|                     .|....|.|.:
plant   159 RLEDRRGESKKRGEVMVAVWLGTQADEAFPDAWHSDASSVQGEGVQSVRSKVYVSPKLWYLRVNV 223

  Fly   353 LKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLE 417
            ::|:::...|.:.....:||:.:   |.:|.|.|. ...:|.:|::||...|         .:.|
plant   224 IEAQDVEPSDRSQPPQAFVKVQV---GNQILKTKL-CPNKTTNPMWNEDLVF---------VAAE 275

  Fly   418 GVSLELMLLDWDRVT--KNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLNE 474
            ....:..|...::||  |:||:||| :...:.....|:|        |...::|:.|.:
plant   276 PFEEQFFLTVENKVTPAKDEVMGRL-ISPLSVFEKRLDH--------RAVHSKWYNLEK 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 24/125 (19%)
C2B_Synaptotagmin-4 332..473 CDD:176049 34/175 (19%)
FTIP1NP_568175.2 C2B_MCTP_PRT_plant 55..181 CDD:176024 28/151 (19%)
C2C_MCTP_PRT_plant 218..370 CDD:175986 30/130 (23%)
C2D_MCTP_PRT_plant 382..511 CDD:176025
PRT_C 639..794 CDD:337028
Blue background indicates that the domain is not in the aligned region.

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