DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and AT2G21010

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_179697.2 Gene:AT2G21010 / 816635 AraportID:AT2G21010 Length:256 Species:Arabidopsis thaliana


Alignment Length:243 Identity:60/243 - (24%)
Similarity:104/243 - (42%) Gaps:57/243 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 DPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIG 295
            :|||:::|..||....||.|.....||.::|:|.|   ::.|.:...|.|.:..:::..:.|.:|
plant     5 NPYVQIELSEDKISSKKTTVKHKNLNPEWNEEFKF---SVRDPKTQVLEFNVYGWEKIGKHDKMG 66

  Fly   296 EVVCPLTSIEIGDISKEALSI--------SKEIQPRSLKIRAQGRGELLISLCWQP--------- 343
            ..|..|.  |:....::|.::        .:|.||      .:.||:|.:.|.::|         
plant    67 MNVLALK--ELAPDERKAFTLEL
RKTLDGGEEGQP------GKYRGKLEVELLYKPFTEEEMQAV 123

  Fly   344 ---------AAGRLTVVLLKARNLPRMDVTGL--ADPYVKIYLLYNGQRIAKKKTHVKKRTLSPV 397
                     |.|.|.|::..|.     ||.|.  .:|||.||  :.|:   ::||...|:...|.
plant   124 QKAPEGTPVAGGMLVVIVHSAE-----DVEGKHHTNPYVHIY--FKGE---ERKTKNVKKNKDPK 178

  Fly   398 FNESFAF---DIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLEL 442
            :||.|:|   :.|..|.....:...|..:.||.     ..|.:|.:::
plant   179 WNEEFSFMLEEPPVHEKLHVEVFSTSSRIGLLH-----PKETLGYVDI 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 24/98 (24%)
C2B_Synaptotagmin-4 332..473 CDD:176049 34/134 (25%)
AT2G21010NP_179697.2 C2 2..87 CDD:278593 23/86 (27%)
C2 135..238 CDD:278593 28/102 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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