DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and Syt13

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_109650.1 Gene:Syt13 / 80976 MGIID:1933945 Length:426 Species:Mus musculus


Alignment Length:502 Identity:130/502 - (25%)
Similarity:207/502 - (41%) Gaps:125/502 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VPAI-LGL---TAAAVLS--SVACICARQMR-----LRNKKQSQHDASFP--FQPTRRPTAVRSP 67
            ||.| ||.   ||.::|:  .|.|:| |.|.     |...::...:.:.|  .|..::....:|.
Mouse     5 VPVIALGATLGTATSILALCGVTCLC-RHMHPKKGLLPRDREPDPEKARPGVLQAAQQFNIKKST 68

  Fly    68 SGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSP----IAQPNVKYSEEGDGPAQHAEQQNGNQLT 128
            ....|..|.|.|...|.:         ...|:|    .|...::.:||...||....|.:..   
Mouse    69 EPVQPRPLLKFPDIYGPR---------PAVTAPEVINYADYTLETTEESAAPASPQAQSDSR--- 121

  Fly   129 VVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLT---NGKELTVTDQYGKLGTIYFKLRYL 190
                  ||..:...|...|    .||.|    :|..:.   |.::....:|..||   :|:|.|.
Mouse   122 ------LKRQVTEELSIRP----QNGVV----EDVCVMETWNPEKAASWNQAPKL---HFRLDYD 169

  Fly   191 AERNALMVSIIRCRGLPCKGGS----SGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVV 251
            .::..|.|:.:.......:||.    .|:..:.||.                 .:.|..:|.|.:
Mouse   170 QKKAELFVTSLEAVTSDHEGGCDCYIQGSVAVKTGS-----------------VEAQTALKKRQL 217

  Fly   252 RNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEV-------VCPLTSIEIGDI 309
            ..|    ::|.... .|...:|...:|...:.:.||:||..||||:       ..||.:.:.|::
Mouse   218 HTT----WEEGLAL-PLGEEELPTATLTLTLRTCDRFSRHSVIGELRLGLDGASVPLGAAQWGEL 277

  Fly   310 SKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNL---PRMDVTGLADPYV 371
            ...|            |..:.|.||:|:|:.:.|||.||.|||:||:||   ...::.| .|..|
Mouse   278 KTTA------------KEPSAGAGEVLLSISYLPAANRLLVVLIKAKNLHSNQSKELLG-KDVSV 329

  Fly   372 KIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEV 436
            |:.|.:..|::.||:|...|..::||:||...|::|     ...|...|:||           ||
Mouse   330 KVTLKHQAQKLKKKQTKRAKHKINPVWNEMIMFELP-----DDLLRASSVEL-----------EV 378

  Fly   437 IGR------LELG----GPNSSSTALNHWNEVCNSPRRQIAEWHKLN 473
            :|:      .|||    |.::|.:..:||.|:..:||||||.||:|:
Mouse   379 LGQGEEGPSCELGHCSLGLHASGSERSHWEEMLKNPRRQIAMWHQLH 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 32/153 (21%)
C2B_Synaptotagmin-4 332..473 CDD:176049 55/153 (36%)
Syt13NP_109650.1 C2 160..277 CDD:301316 31/141 (22%)
C2B_Synaptotagmin-13 288..425 CDD:176052 55/153 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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