DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and syt9a

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_001336058.4 Gene:syt9a / 798433 ZFINID:ZDB-GENE-031002-18 Length:547 Species:Danio rerio


Alignment Length:460 Identity:153/460 - (33%)
Similarity:228/460 - (49%) Gaps:86/460 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KQSQHDASFPFQPTRRPTAVRSPS--GQPPHYLKKSPSPTGGKQMGLLSP--------------- 92
            ::|...:|...:.|..||.| ||:  |.||    ..|.|....::...||               
Zfish   122 RRSNARSSVVKETTVPPTPV-SPAVPGSPP----AVPVPEAALKISHTSPDIPLEVESKTQENGV 181

  Fly    93 -----MQDQSTSP----IAQPNVKYSEEGDGPAQHAEQ-QNGNQLTVVDGNGLKHSLHNSLHHSP 147
                 ||.|.|.|    :.|.:::.......|.....| |..:.||.:....||..|:...    
Zfish   182 HGNTRMQRQITDPSSTCVRQSSIRRQMNQSNPDFTVTQFQRQDSLTGMSLGQLKPELYKQR---- 242

  Fly   148 VETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGS 212
                       :||.       |.:.:.:.|..|.::|.|:|..:...|:|.|.|.:.||.| ..
Zfish   243 -----------SLDG-------EDSRSSRVGSCGRLHFILKYDCDLEQLIVKIHRAQDLPAK-DF 288

  Fly   213 SGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTF---YGLNMNDLQ 274
            |||              :|||||:.||||::.|.:|:|.|.|.|||:||.|.|   |.    ||.
Zfish   289 SGT--------------SDPYVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLFPVAYA----DLP 335

  Fly   275 NMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLISL 339
            ...|||.:..|||:||.|:||:||.. ..:::.|..:|. .:.::||  .:.......|:|:.||
Zfish   336 TRKLHFSVYDFDRFSRHDIIGQVVVD-NFLDLVDFPRET-KLCRDIQ--YVSSDNVDLGDLMFSL 396

  Fly   340 CWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAF 404
            |:.|.|||||:.::|||||..||:||.:|||||:.|:.:|:|:.|:||..|:.||:||:||:..|
Zfish   397 CYLPTAGRLTITMIKARNLKAMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIVF 461

  Fly   405 DIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEW 469
            |:|.     .:::.:||.:.::|:|||..|||||...:|. ::......||||:...||:.||.|
Zfish   462 DVPP-----ENIDQISLLVAVMDYDRVGHNEVIGVCRVGN-DAEGLGREHWNEMLTYPRKPIAHW 520

  Fly   470 HKLNE 474
            |.|.|
Zfish   521 HPLVE 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 54/145 (37%)
C2B_Synaptotagmin-4 332..473 CDD:176049 63/140 (45%)
syt9aXP_001336058.4 C2 257..381 CDD:301316 55/146 (38%)
C2B_Synaptotagmin-3-5-6-9-10 390..523 CDD:176048 63/138 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.