DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt11b

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001156003.1 Gene:syt11b / 794707 ZFINID:ZDB-GENE-090601-7 Length:456 Species:Danio rerio


Alignment Length:488 Identity:175/488 - (35%)
Similarity:265/488 - (54%) Gaps:77/488 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PAILGLTAAAVL--SSVACI-----CARQMRLRNKK----QSQHDASFPFQPTRRPTAVRSPSGQ 70
            |.:.|...|.||  :..|.|     |.:.....|.|    ||:|.               .|...
Zfish    15 PVLAGFIGAGVLVVAVFALIYLWTCCQKHYNRTNYKLHGIQSEHS---------------DPLTD 64

  Fly    71 PP----HYLK-KSPSP---TGGKQMGLLSPMQDQSTS---------PIAQPNVKYSEEGD--GPA 116
            ||    |.|| .|..|   |..|::..::......||         |:...|:..:.|..  |..
Zfish    65 PPYKFIHMLKGMSIYPDALTNSKRIIRVAREARAQTSDRVQGSKGRPVVLVNMDSAAESGLLGEK 129

  Fly   117 QHAEQQNGNQLTVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLG 181
            |...:::|::::.::......:.:..|..|...:....|.|::      :.....|..|:..: |
Zfish   130 QMRLEESGHEVSRLERELPVRADYCCLDSSSASSSQTSSTTVS------STATPFTPADEPSR-G 187

  Fly   182 TIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKV 246
            .:...:.|...:.||:|:|:..||||...|.:|              :.|||||:.:||:|:|:|
Zfish   188 DLSIAIDYNFPKKALVVTILEARGLPAVEGQTG--------------SADPYVKMTILPEKKHRV 238

  Fly   247 KTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISK 311
            ||||:|.|..|.:||.|||||:..:.|.:::|||::|||||:||||||||.:.||..:   |.|.
Zfish   239 KTRVLRKTLEPAFDETFTFYGVPYSSLSDLTLHFLVLSFDRFSRDDVIGEAMVPLAGV---DPST 300

  Fly   312 EALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGL-ADPYVKIYL 375
            ..:.|:::|..|::  :....||||:||.:||.:.||:||:|||::||::|:||| |:||||:.:
Zfish   301 GRVHITQQITKRNM--QCVSHGELLVSLSYQPVSHRLSVVVLKAKHLPKLDITGLSANPYVKLNV 363

  Fly   376 LYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRL 440
            .|..:|||||||||||.||:|||||||.:|:||     ..|..:|:|.:::|:||.|||:.:|||
Zfish   364 FYGHKRIAKKKTHVKKCTLNPVFNESFIYDVPA-----ELLPDISIEFLVMDFDRTTKNQALGRL 423

  Fly   441 ELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLN 473
            .||..:...:...||.|||.:|||||::||.||
Zfish   424 VLGADSPCPSGAAHWQEVCQNPRRQISKWHTLN 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 59/142 (42%)
C2B_Synaptotagmin-4 332..473 CDD:176049 76/141 (54%)
syt11bNP_001156003.1 C2 186..309 CDD:472691 58/140 (41%)
C2B_Synaptotagmin-4 320..456 CDD:176049 76/140 (54%)

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