DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and Pla2g4d

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001019308.1 Gene:Pla2g4d / 78390 MGIID:1925640 Length:825 Species:Mus musculus


Alignment Length:268 Identity:68/268 - (25%)
Similarity:108/268 - (40%) Gaps:66/268 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYD 260
            |.|.|:..|.||       ..|:      .:||  ||||.:||......|.||:.|.|:.:||::
Mouse    33 LTVKILEARSLP-------RADL------LSQA--DPYVTVQLPTASGMKFKTQTVTNSSHPVWN 82

  Fly   261 EDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSL 325
            |.|:|  |..:.::|: |...|...|..::||:..:|...::.|..|.:.::..|::.: .|..|
Mouse    83 ETFSF--LIQSQVKNI-LELTIYDEDVITKDDICFKVSYDVSEILPGQLLQKTFSLNPQ-GPEEL 143

  Fly   326 KIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDV-------TGLADPYVKIYLLYNGQRIA 383
            .:      |||:...|.|....:|..:|.||.|..:||       |.:|....|:.|     .:.
Mouse   144 DV------ELLMERTWDPPENLITNNVLVARELSHLDVSLDRAGNTAMAAGQDKLEL-----ELM 197

  Fly   384 KKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSS 448
            .|.::...:|..|  :.:|.|......|....|.|.                      |.||.:|
Mouse   198 LKGSYEDTQTFFP--DTAFTFSFHYMRGQDTELNGY----------------------LRGPRNS 238

  Fly   449 STALNHWN 456
            .     ||
Mouse   239 G-----WN 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 36/125 (29%)
C2B_Synaptotagmin-4 332..473 CDD:176049 30/132 (23%)
Pla2g4dNP_001019308.1 C2_cPLA2 32..151 CDD:176001 41/142 (29%)
Patatin_and_cPLA2 278..814 CDD:299702
PLAc 283..758 CDD:214474
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q86XP0 339..340
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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