DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and sytl1

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001122005.1 Gene:sytl1 / 777759 ZFINID:ZDB-GENE-060503-439 Length:539 Species:Danio rerio


Alignment Length:549 Identity:127/549 - (23%)
Similarity:201/549 - (36%) Gaps:191/549 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RLRNKKQSQHDASFPFQPTRRPTAVRSPSGQPPHYLKKSPSPTGG----------KQMGLLSPM- 93
            |:|..:|:..|          |..:||.||...|..:......||          |:.|...|: 
Zfish    37 RVRKLQQTVSD----------PVHLRSLSGAWFHEERSKRYEKGGADVVHASLRRKRRGKDLPLT 91

  Fly    94 -----------------QDQSTSPIAQPNV------KYSEEGDGPAQHAEQQNGNQLTV------ 129
                             :|::.....|.|:      |:.|:.:...:..|....|.:|:      
Zfish    92 AIFDKGNNSSHVHEQQEEDRNAERDLQGNMNEREDDKHQEQKESGQEDGESLISNAITIPQSRTR 156

  Fly   130 -------VDGNGLKHSLHNSLHH--------SPVETIAN----------------GSVTITLDDH 163
                   :.|:|.:.|:..|.:.        ||...|.:                |||| :|..|
Zfish   157 NVTKRNEILGSGFEDSVEESENKERRILPSTSPTLQIDSEGDIDSGSTEINYTRFGSVT-SLTSH 220

  Fly   164 SLTNGKELTV--TDQYGKL---GTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMN 223
            .:.||..:::  ...:|.:   |.|.|.|:|......|.|.||||:            |:.:...
Zfish   221 HMMNGSLMSLYSVGDFGDVVVSGRIQFSLQYDVRTEELYVHIIRCQ------------DLASARK 273

  Fly   224 GRTQAATDPYVKLQLLPD--KQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFD 286
            .|    :|||||:.||||  .:.|.||.|.|.|.||||||..| |.:...||....|...:...:
Zfish   274 NR----SDPYVKVYLLPDNTSRSKKKTAVRRKTLNPVYDETMT-YKVRRLDLPARVLSMSVWHME 333

  Fly   287 RYSRDDVIGEVVCPLTSIEIG--DISKEALSISKEIQP--RSLKIRAQ-------GRGELLISLC 340
            |..|:..:||:     .:.:|  |.|:.        ||  ::|:.|.|       .||.:|.|:.
Zfish   334 RMRRNLFLGEL-----EVRLGQWDWSQN--------QPTWQNLQPRVQLSPEAIISRGTILFSIK 385

  Fly   341 W---------QPAAGRLTVVLLKARN-LPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLS 395
            :         .||.|.|.:.|.:... ||..  .|..:.|||..:|.:...::.::|.|.:.::|
Zfish   386 FVPPGSEGRGNPATGELHIWLREIVGLLPTK--RGAPNTYVKSVVLPDESGVSGQQTRVVRGSVS 448

  Fly   396 PVFNESFAFD---------------------------IPAAEGAGASLEGVSLELMLLDWDRVTK 433
            ||||.:..:|                           :..:.|:|.|. |.|     :.|...|:
Zfish   449 PVFNHTMVYDGFQSSDLIQACAEITVWNPHPSGCLGGVRLSTGSGLSY-GQS-----VCWMDSTE 507

  Fly   434 NEVIGRLELGGPNSSSTALNHWNEVCNSP 462
            :|:                |.|:.|..||
Zfish   508 DEI----------------NVWSSVIQSP 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 46/149 (31%)
C2B_Synaptotagmin-4 332..473 CDD:176049 37/168 (22%)
sytl1NP_001122005.1 PHD_SF 12..>43 CDD:304600 2/5 (40%)
C2A_SLP-1_2 242..364 CDD:176039 48/151 (32%)
C2B_SLP_1-2-3-4 377..531 CDD:175987 37/168 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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