DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and SYT1

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001129277.1 Gene:SYT1 / 6857 HGNCID:11509 Length:422 Species:Homo sapiens


Alignment Length:473 Identity:146/473 - (30%)
Similarity:230/473 - (48%) Gaps:129/473 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PDASVMDTIVPAILGLTAAAVLSSVACICARQM-RLRNKKQSQHDASFPFQPTRRPTAVRSPSGQ 70
            |.|.:...||..:|      ||:...|||.:.: :.:|||:.:.                     
Human    58 PWALIAIAIVAVLL------VLTCCFCICKKCLFKKKNKKKGKE--------------------- 95

  Fly    71 PPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGL 135
                       .|||                                       |.:.:.|...|
Human    96 -----------KGGK---------------------------------------NAINMKDVKDL 110

  Fly   136 KHSLHN-SLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVS 199
            ..::.: :|.....||             .||:|:|.....:..|||.:.:.|.|..:.|.|:|.
Human   111 GKTMKDQALKDDDAET-------------GLTDGEEKEEPKEEEKLGKLQYSLDYDFQNNQLLVG 162

  Fly   200 IIRCRGLPC--KGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDED 262
            ||:...||.  .||:|                 |||||:.|||||:.|.:|:|.|.|.|||::|.
Human   163 IIQAAELPALDMGGTS-----------------DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQ 210

  Fly   263 FTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKE---ALSISKEIQPRS 324
            ||| .:..::|...:|...:..|||:|:.|:|||...|:.:::.|.:::|   ..|..||.|.: 
Human   211 FTF-KVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEK- 273

  Fly   325 LKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHV 389
                   .|::..||.:.|.||:||||:|:|:||.:|||.||:||||||:|:.||:|:.||||.:
Human   274 -------LGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTI 331

  Fly   390 KKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNH 454
            ||.||:|.:||||:|::|..:     ::.|.:.:.:||:|::.||:.||::.: |.||:...|.|
Human   332 KKNTLNPYYNESFSFEVPFEQ-----IQKVQVVVTVLDYDKIGKNDAIGKVFV-GYNSTGAELRH 390

  Fly   455 WNEVCNSPRRQIAEWHKL 472
            |:::..:|||.||:||.|
Human   391 WSDMLANPRRPIAQWHTL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 53/147 (36%)
C2B_Synaptotagmin-4 332..473 CDD:176049 66/141 (47%)
SYT1NP_001129277.1 Syt1_N 6..113 CDD:409248 19/131 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..142 7/41 (17%)
Phospholipid binding. /evidence=ECO:0000305 136..382 107/277 (39%)
C2A_Synaptotagmin-1-5-6-9-10 143..265 CDD:176031 49/139 (35%)
C2B_Synaptotagmin-1 274..409 CDD:176047 66/141 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.820

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