DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and Syt9

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_068689.2 Gene:Syt9 / 60510 MGIID:1926373 Length:491 Species:Mus musculus


Alignment Length:505 Identity:167/505 - (33%)
Similarity:247/505 - (48%) Gaps:100/505 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PDASV-MDTIVPAILGLTAAAVLSSVAC-ICARQMRLR-----NKKQSQHDASFPFQPTRRPTAV 64
            ||.|| :.|:|....||....|...|:. :|....|.|     :|..:|.    |...|...|..
Mouse    48 PDISVSLLTLVVTACGLALFGVSLFVSWKLCWVPWRERGLFSGSKDNNQE----PLNYTDTETNE 108

  Fly    65 RSPSG---QPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYS-------EEGDGPAQH- 118
            :..|.   .||     :|.|....::...||....||.|..|.|..::       .|....|:| 
Mouse   109 QENSEDFLDPP-----TPCPDSSMKISHTSPDIPLSTQPGGQENCAHAVRVQRQVTEPTPSARHN 168

  Fly   119 ---------------AEQQNGNQLTVVDGNG-LKHSLHNSLHHSPVETIANGSVTITLDDHSLTN 167
                           .:.|...|||   |.| :|..|:..      .::.|       ||...:|
Mouse   169 SIRRQLNLSNPDFNIQQLQRQEQLT---GIGRIKPELYKQ------RSLDN-------DDGRRSN 217

  Fly   168 GKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDP 232
            .|..      |||.   |.|:|..:...|:|.|.:...||.| ..|||              :||
Mouse   218 SKAC------GKLN---FILKYDCDLEQLIVKIHKAVNLPAK-DFSGT--------------SDP 258

  Fly   233 YVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEV 297
            |||:.||||::.|.:|:|.|.|.|||:||.|.| .::.|||:...|||.:..|||:||.|:||:|
Mouse   259 YVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLF-PVHYNDLEARKLHFSVYDFDRFSRHDLIGQV 322

  Fly   298 VCPLTSIEIGDISKEALSISKEIQ---PRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLP 359
            |.. ...::.|..:|.: :.|:|:   ..::.:     |||:.|||:.|.|||||:.::|||||.
Mouse   323 VVD-HFFDLADFPRECI-LWKDIEYVTNDNVDL-----GELMFSLCYLPTAGRLTITIIKARNLK 380

  Fly   360 RMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELM 424
            .||:||.:|||||:.|:.:|:|:.|:||..|:.||:||:||:..||:|.     .|::.:.|.:.
Mouse   381 AMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIVFDVPP-----ESIDQIHLSIA 440

  Fly   425 LLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLNE 474
            ::|:|||..|||||..::|. .:.....:||:|:.:.||:.||.||.|.|
Mouse   441 VMDYDRVGHNEVIGVCQVGN-EAERLGRDHWSEMLSYPRKPIAHWHSLME 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 55/145 (38%)
C2B_Synaptotagmin-4 332..473 CDD:176049 63/140 (45%)
Syt9NP_068689.2 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 9..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..147 16/64 (25%)
C2 221..345 CDD:387358 56/150 (37%)
C2B_Synaptotagmin-3-5-6-9-10 354..487 CDD:176048 63/138 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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