DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and Syt7

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_006231127.1 Gene:Syt7 / 59267 RGDID:62013 Length:687 Species:Rattus norvegicus


Alignment Length:397 Identity:132/397 - (33%)
Similarity:214/397 - (53%) Gaps:74/397 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 PTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHH 145
            |.|||.:         :|:|:         .|..|...::::...:.:|.|       |.||| .
  Rat   358 PAGGKAV---------NTAPV---------PGQTPHDESDRRTEPRSSVSD-------LVNSL-T 396

  Fly   146 SPVETIANGSVTITLDDHSLTNG--KELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPC 208
            |.:..::.||     ::.....|  :|        .||.|.|.:.|..:.:.|.|.:::.:.||.
  Rat   397 SEMLMLSPGS-----EEDEAHEGCSRE--------NLGRIQFSVGYNFQESTLTVKVMKAQELPA 448

  Fly   209 KGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDL 273
            | ..|||              :||:||:.|||||:||::|:|.|...||.::|.|.|.|.....:
  Rat   449 K-DFSGT--------------SDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKV 498

  Fly   274 QNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLIS 338
            ....|:..:|.:||:||:|.||||..||..:::..:.    :..|:::|.|  ..:..|||||:|
  Rat   499 VQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQ----TFWKDLKPCS--DGSGSRGELLLS 557

  Fly   339 LCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFA 403
            ||:.|:|..:.|.::|||||..||:.|.:|||||::|:|..:|:.||||..|||.|:|:||||||
  Rat   558 LCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFA 622

  Fly   404 FDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLEL---GGPNSSSTALNHWNEVCNSPRRQ 465
            ||||..:     |...::.:.::|.|::::|:|||::.|   .||..    :.||.::...||:.
  Rat   623 FDIPTEK-----LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGE----VKHWKDMIARPRQP 678

  Fly   466 IAEWHKL 472
            :|:||:|
  Rat   679 VAQWHQL 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 47/142 (33%)
C2B_Synaptotagmin-4 332..473 CDD:176049 64/144 (44%)
Syt7XP_006231127.1 C2A_Synaptotagmin-7 419..543 CDD:176032 47/142 (33%)
C2B_Synaptotagmin-7 551..686 CDD:176050 64/144 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X61
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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