DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt2a

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_021325566.1 Gene:syt2a / 567877 ZFINID:ZDB-GENE-060503-315 Length:430 Species:Danio rerio


Alignment Length:456 Identity:138/456 - (30%)
Similarity:221/456 - (48%) Gaps:106/456 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LKKSPS------PTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGN 133
            |||.|:      |||...:         :.:|........|.|..||....:         |.|:
Zfish     6 LKKKPAAMVGPEPTGASAL---------TMAPAVSTPADNSTEHQGPVSKND---------VFGD 52

  Fly   134 GLKHSLHNSLHHSPV---ETIANGSVTITL--------------------------DDHSLTNGK 169
             :|:...|.:...|:   ..||...|.:.|                          .|..:.|.|
Zfish    53 -IKNKFLNEMDKLPLPPWAIIAIAIVAVVLILTCCFCIVKKTCLKKKKGKKGKKGKGDMGMKNMK 116

  Fly   170 --------------ELTVTD-------QYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSS 213
                          ::.:|:       :..|||.:.|.|.|....:.|.|.|::...| ....|.
Zfish   117 GGEKQEEDDDEEDIDMGITEEKEEEPKEKEKLGKLQFSLDYDFSASQLTVGILQAADL-LSMDSG 180

  Fly   214 GTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSL 278
            ||              :|||||:.:||||:.|..|:|.:.|.|||::|.|.| .:...::...:|
Zfish   181 GT--------------SDPYVKVFILPDKKKKYDTKVHKKTLNPVFNETFHF-KIPFTEMGGKTL 230

  Fly   279 HFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKE--ALSISKEIQPRSLKIRAQGRGELLISLCW 341
            ...:..|||:|:.||||||..|:.::::....::  .|..:::.:|..|       |::.|||.:
Zfish   231 VMSVYDFDRFSKHDVIGEVKIPMNTLDLAQPIEQWRDLDSAEKEEPEKL-------GDICISLRY 288

  Fly   342 QPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDI 406
            .|.||:||:.:|:|:||.:|||.||:||||||:||.||:|:.||||.|||.||:|.:||||:|:|
Zfish   289 VPTAGKLTICILEAKNLKKMDVGGLSDPYVKIHLLQNGKRLKKKKTTVKKNTLNPYYNESFSFEI 353

  Fly   407 PAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHK 471
            |..:     ::.:...:.:||:|::.||:.||::.:|. .:..|.|.||:::..:|||.||:||.
Zfish   354 PQDQ-----MQKIQAVITVLDYDKIGKNDAIGKIWVGS-KAQGTELRHWSDMLANPRRPIAQWHP 412

  Fly   472 L 472
            |
Zfish   413 L 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 45/144 (31%)
C2B_Synaptotagmin-4 332..473 CDD:176049 66/141 (47%)
syt2aXP_021325566.1 C2A_Synaptotagmin-1-5-6-9-10 148..270 CDD:176031 44/137 (32%)
C2B_Synaptotagmin-1 279..414 CDD:176047 67/148 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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