DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt12

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001122205.1 Gene:syt12 / 566397 ZFINID:ZDB-GENE-081022-147 Length:420 Species:Danio rerio


Alignment Length:425 Identity:105/425 - (24%)
Similarity:182/425 - (42%) Gaps:106/425 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RRPTAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQN 123
            |..:|.|.||      |:...:|.|.:.:|.|..|                      ::..:|..
Zfish    88 RASSASRKPS------LQLLDTPDGLRDLGTLELM----------------------SRELDQSG 124

  Fly   124 GNQLTVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLR 188
            |             ||:.|:....:.:|::.:.|.   .|..|.| :|.||            |.
Zfish   125 G-------------SLNRSVSSESLCSISSVAQTF---GHDFTVG-QLEVT------------LE 160

  Fly   189 YLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRN 253
            .....:.|:|::.:.:.|..|...:..|               .::.:.|:|.:.:...|:|.||
Zfish   161 LDTRASLLLVALHQGKDLLEKEEENFPG---------------CFITVTLVPQQINLGATQVQRN 210

  Fly   254 TRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIE-----------IG 307
            ....|:||.|: ..|...:|:..||.|.....|...|:...|.....|:.::           :.
Zfish   211 AFTVVFDERFS-VPLESVNLEENSLRFSTFGVDSDERNITAGVAELKLSDLDLPYRPFNAWLYLQ 274

  Fly   308 DISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVK 372
            ||:|...::                ||:|:||.:.|.|.|||||:.||:||...:....|||:||
Zfish   275 DINKAVDAV----------------GEILLSLSYLPTAERLTVVIAKAKNLVWTNGKTTADPFVK 323

  Fly   373 IYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVI 437
            :|||.:|::|:||||.:|:...:|:|||:..|.:||     ..|:.:||.:.:.:.....:.|.:
Zfish   324 VYLLQDGRKISKKKTSIKRDDTNPIFNEAMIFSVPA-----IVLQDLSLRVTVAESTEDGRGENV 383

  Fly   438 GRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            |.:.: ||.:|...:.|||::..:.|:.::.||.|
Zfish   384 GHVII-GPEASGMGITHWNQMLATLRKPVSMWHPL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 28/153 (18%)
C2B_Synaptotagmin-4 332..473 CDD:176049 53/141 (38%)
syt12NP_001122205.1 C2 151..262 CDD:301316 30/139 (22%)
C2B_Synaptotagmin-12 283..418 CDD:176051 53/157 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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