DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and si:ch211-266g18.6

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_005169912.1 Gene:si:ch211-266g18.6 / 565707 ZFINID:ZDB-GENE-131121-599 Length:1009 Species:Danio rerio


Alignment Length:501 Identity:122/501 - (24%)
Similarity:199/501 - (39%) Gaps:107/501 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 MRLRNKKQSQHDASFPFQPTRRPTAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPM-QDQSTSPIA 102
            :.:|..|........|.:|. .|:...:..||....:|........|...||:.: :.|.|.|..
Zfish   524 VHIREDKHMDKSVPEPIKPA-HPSDDVAGFGQDSSEIKVDVDSAETKSDVLLNVLARAQKTRPPV 587

  Fly   103 QPNVKYSE------------------EGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSP-- 147
            ..|:...|                  |...||:....:.|..:       |:..|.:|...:|  
Zfish   588 LQNITNQEPNLEGTDDTVPSIVIVPSESPDPAEMKGNKRGALV-------LEALLQSSTAKNPSY 645

  Fly   148 -VETIANGSVTITLDDHSLT------------NGKELTVTDQYGKL----------------GTI 183
             .:...:..|....||.||:            :...|::||:.|.|                |::
Zfish   646 IADAWEDEGVNSDDDDTSLSSYGSDLSSRKGFSASALSLTDRTGSLLSVYSDAGDFGTVEVQGSV 710

  Fly   184 YFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDK--QHKV 246
            .|.:.| :....|::.|.:|:.|..             .|.|.| .||||||..|.|||  :.|.
Zfish   711 EFAVMY-SPVGELIIMIEQCQDLAI-------------ANPRKQ-RTDPYVKTYLYPDKSRRSKR 760

  Fly   247 KTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISK 311
            ||.:.:.|.|||:.|... |.:|..:|...||:..:...|...|:..:|:|.   .|....|...
Zfish   761 KTTIKKRTVNPVFVESLR-YKVNREELPEKSLNLSVWHNDSRGRNVFLGQVE---LSFRTWDWGH 821

  Fly   312 EALSISKEIQPRSLK--IRAQGRGELLISLCWQPAA---------GRLTVVLLKARNLPRMDVTG 365
            |||: ...:||::.:  ...:..|.|.:||.:.|:|         |.:.|.|.:|:.|.|:...|
Zfish   822 EALT-WYNLQPKTSENAETKESNGLLSVSLKYVPSASTGGSKSSTGEIHVWLREAKELRRLKPQG 885

  Fly   366 LADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFD-IPAAEGAGASLEGVSLELMLLDWD 429
            : |.:||.|:|.:.::.:::||.|.|:|..||:|.:..:| ....|...|..|       |..||
Zfish   886 V-DSFVKCYILPDTRKKSRQKTRVVKKTQDPVYNHAMVYDGFKTGEVTEACCE-------LTVWD 942

  Fly   430 RVT-KNEVIG--RLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            ..| .|:.:|  ||.||...|....:: |   .:|...::..|.::
Zfish   943 HNTLANQFLGGVRLSLGTGQSYGKKVD-W---MDSVDEEVQIWKRM 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 43/160 (27%)
C2B_Synaptotagmin-4 332..473 CDD:176049 44/154 (29%)
si:ch211-266g18.6XP_005169912.1 C2A_SLP-1_2 707..830 CDD:176039 42/142 (30%)
C2B_SLP_1-2-3-4 843..999 CDD:175987 44/154 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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