DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and sytl2a

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_009303749.1 Gene:sytl2a / 563188 ZFINID:ZDB-GENE-130723-2 Length:1447 Species:Danio rerio


Alignment Length:433 Identity:106/433 - (24%)
Similarity:180/433 - (41%) Gaps:78/433 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 AVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQL 127
            ::.:.|..||:.......|...|.|.|..|...|                    |..|.:|.:..
Zfish  1046 SMENVSAVPPNTKTSFSDPEQVKMMSLSVPALMQ--------------------QEMECRNSDCA 1090

  Fly   128 TVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTV-TDQYGKL---GTIYFKLR 188
            :|       .|.:|....| ..|.:|.|....:...|...|..::: :.::|.:   ||:.|.:.
Zfish  1091 SV-------SSFYNDRQRS-CNTPSNFSTCSEVASMSSVTGSVMSIYSSEFGYVEVKGTVQFAIH 1147

  Fly   189 YLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQH--KVKTRVV 251
            |:.:.....:.:::|:.|       ...|:       .:..:|||||..|||||..  |.||.|.
Zfish  1148 YVQKLGEFHIFVVQCKDL-------AVADV-------KRNRSDPYVKCYLLPDKAKYGKKKTCVR 1198

  Fly   252 RNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSI 316
            :.|.:|.|:|...| .:.|..|:...|:..:...|.:.|:..:|||...|...:..:.......:
Zfish  1199 KKTLDPTYNEILRF-KIPMEMLKTQKLNISVWHNDTFGRNSFLGEVEVDLAEWDFNNTQMNEYLL 1262

  Fly   317 SKEIQ-PRSLKIRAQGR---GELLISLCWQPAA---------GRLTVVLLKARNLPRMDVTGLA- 367
            ...:| |.|.|....|.   .|:.::|.:.|..         |.:.:.:.:.:|||..  .|:| 
Zfish  1263 KGRVQIPTSPKHSFGGEEMSAEIKVALRFLPQTTLSHKNKGNGEVQIWVKECKNLPIS--RGVAI 1325

  Fly   368 DPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAG-ASLEGVSLELMLLDWDRV 431
            ||:||..:|....|.:::||.|.||..:||||.:..:|     |.| ..|:.:.:||.:.|.||:
Zfish  1326 DPFVKCAILPENNRKSRQKTRVLKRAPNPVFNHTMVYD-----GFGHDDLKDICVELTVWDHDRL 1385

  Fly   432 TKNEVIGRLELGGPNSSSTALNHWNEV--CNSPRRQIAEWHKL 472
             .|..||.:.||    ..|..::.:||  .:|...:.|.|.::
Zfish  1386 -NNHFIGGIRLG----PGTGKSYGSEVNWMDSNVAEAALWERM 1423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 36/148 (24%)
C2B_Synaptotagmin-4 332..473 CDD:176049 44/157 (28%)
sytl2aXP_009303749.1 PHD_SF 5..>37 CDD:328929
C2A_SLP-1_2 1139..1263 CDD:176039 35/138 (25%)
C2B_SLP_1-2-3-4 1283..1438 CDD:175987 44/153 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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