DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt13

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_017212345.2 Gene:syt13 / 550345 ZFINID:ZDB-GENE-050417-135 Length:530 Species:Danio rerio


Alignment Length:481 Identity:116/481 - (24%)
Similarity:197/481 - (40%) Gaps:95/481 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AILGLTAAAVLSSVACICARQMRLRNKKQSQHDASFPFQPTR-RPTAVRSPSGQPPHYLKKSPSP 81
            |:||.|...| |.|..:|...:..::.|:.:.::.....|.: :|:.:.:.:....|...:...|
Zfish   117 ALLGATLGTV-SGVLTLCGLSLLCKSCKKGKLESGDEADPEKAKPSILHTLTQFSVHKCTEPIQP 180

  Fly    82 TGGKQMGLLSP-MQDQSTSPIAQPNVKYSEEG-DGPAQHAEQQNGNQLTVVDGNGLKHSL--HNS 142
                |..|..| :.....|..:|..:.|.|.| ......||....||.|..:.   ..||  ..|
Zfish   181 ----QASLKFPQIYRPKPSVTSQEVINYKEHGASNDTSAAELDTCNQATEREE---VFSLPRQAS 238

  Fly   143 LHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLP 207
            ....|..:...|::|        |:...|     |.||   :|.:....|...|.::|:....:.
Zfish   239 ADEIPCSSEQTGAMT--------TSSSIL-----YPKL---HFSISLHKESGELHINIVEAENIS 287

  Fly   208 CKGGSSGTGDIPTGMNGRTQAATDPYVK-LQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMN 271
            .:.|..|                  |:. ...:.::|....|.|.:...:..:.|:..| .|.|.
Zfish   288 VEAGCEG------------------YISGCVSVSEEQKHAHTAVHKLAVHVQWGEELVF-ALPME 333

  Fly   272 DLQN---------MSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISK----EIQPR 323
            ..::         :|||    ..||:|.:..:|     :...::.|:|   :.:..    ::||.
Zfish   334 STEDTDSLDGEVALSLH----CCDRFSHNSTLG-----MMRFKLADVS---MMLDADCWVDLQPP 386

  Fly   324 SLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTH 388
            ..:: ....||||:||.:.|||.||.||::|||.|....:....|..||:.|.:...::.||:|.
Zfish   387 KQEV-TSSTGELLLSLSYLPAANRLGVVVMKARGLQSDKLKDNIDLSVKLTLKHQNAKLKKKQTR 450

  Fly   389 VKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELM-------LLDWDRVTKNEVIGRLELGGPN 446
            ..|..::||:||....::|:...|.:|   |.||::       ||.         :||..| |..
Zfish   451 RVKHKMNPVWNEMMMLELPSELLAKSS---VDLEVLNLASPGTLLP---------LGRCML-GLQ 502

  Fly   447 SSSTALNHWNEVCNSPRRQIAEWHKL 472
            :|.|.|.||.::.::||:|||.||.|
Zfish   503 TSGTGLQHWKQMLDNPRKQIAMWHPL 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 25/156 (16%)
C2B_Synaptotagmin-4 332..473 CDD:176049 54/148 (36%)
syt13XP_017212345.2 C2A_Synaptotagmin-13 261..383 CDD:176059 25/155 (16%)
C2B_Synaptotagmin-13 394..529 CDD:176052 54/148 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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