DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt4

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001164985.1 Gene:syt4 / 447980 XenbaseID:XB-GENE-5963049 Length:424 Species:Xenopus tropicalis


Alignment Length:477 Identity:180/477 - (37%)
Similarity:261/477 - (54%) Gaps:89/477 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VPAILGLTA----AAVLSSVACICARQMRLRNKKQSQHDASFPFQPTRRPTAVRSPSGQPPHYLK 76
            :|:::||.:    ...:|..:.||.:      :|.::.:.:.|::..              |.||
 Frog    14 IPSVVGLVSGFGLVFTVSLFSWICCQ------RKSAKSNTTPPYKFV--------------HVLK 58

  Fly    77 ---------KSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGP-------AQHAEQQNGN 125
                     .|....|..:...|:|....|.:.:.....|....|:.|       :...|..:..
 Frog    59 GVDIYPESLNSKKKFGADEKTELAPKSLISKTSLHLDLEKRDLNGNFPKANKVRSSPDLEDFSQP 123

  Fly   126 QLTVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYL 190
            ||...|.:.:          ||....:|.||.      ||         |:..||||::|.|.|.
 Frog   124 QLPEKDKDSV----------SPESVKSNASVV------SL---------DKQDKLGTLFFALEYN 163

  Fly   191 AERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTR 255
            .|:.|.:|:|...|.||.....|.|              :|||:|:.:||:|:|||||||:|.|.
 Frog   164 FEKKAFVVNIKEARSLPAMDEQSMT--------------SDPYIKMTILPEKKHKVKTRVLRKTL 214

  Fly   256 NPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEI 320
            :|.:||.|||||:..:.:|::.|||:||||||:|||||||||..||:.||:.|   ..:.:::||
 Frog   215 DPAFDETFTFYGIPYSQVQDLVLHFIILSFDRFSRDDVIGEVSFPLSGIELSD---GRVLMNREI 276

  Fly   321 QPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKK 385
            ..|::: ::.||||||||||:|.....||||:||||:||:.:|:||:|||||:.|.:..:||:||
 Frog   277 NKRNVR-KSAGRGELLISLCYQSTTNTLTVVVLKARHLPKAEVSGLSDPYVKVNLYHAKKRISKK 340

  Fly   386 KTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSST 450
            ||||||.|.:.||||.|.|||| .||    ||.:|:|.:::|.||.::|||||||.||. ::..|
 Frog   341 KTHVKKCTPNAVFNELFVFDIP-CEG----LEDISVEFLVMDSDRGSRNEVIGRLILGS-SADGT 399

  Fly   451 ALNHWNEVCNSPRRQIAEWHKL 472
            ...||.|:|..||||||:||.|
 Frog   400 GGEHWKEICEHPRRQIAKWHML 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 66/142 (46%)
C2B_Synaptotagmin-4 332..473 CDD:176049 81/141 (57%)
syt4NP_001164985.1 C2A_Synaptotagmin-4-11 152..278 CDD:176034 66/142 (46%)
C2B_Synaptotagmin-4 287..422 CDD:176049 81/141 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6280
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 283 1.000 Inparanoid score I2810
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D329810at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 1 1.000 - - oto102671
Panther 1 1.100 - - O PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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