DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt9b

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001003985.1 Gene:syt9b / 445476 ZFINID:ZDB-GENE-040822-6 Length:517 Species:Danio rerio


Alignment Length:399 Identity:141/399 - (35%)
Similarity:211/399 - (52%) Gaps:74/399 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LSPMQDQSTSPIA---------QPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHH 145
            ::.:|.|.|.|.:         |.||  |......||...|::      :.|.||..........
Zfish   156 IARVQRQVTEPTSSVRHNSIRRQMNV--SNPDFNMAQFQRQES------ITGPGLGRIKPELYKQ 212

  Fly   146 SPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKG 210
            ..|:|          ||     |:.   .|..|:|   :|.::|..:...|:|.|.|.:.||.| 
Zfish   213 RSVDT----------DD-----GRR---ADSCGRL---HFIIKYDCDLEQLIVKIHRAQDLPAK- 255

  Fly   211 GSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTF---YGLNMND 272
            ..:||              :|||||:.||||::.|.:|:|.|.|.||::||.|.|   ||    :
Zfish   256 DFTGT--------------SDPYVKIYLLPDRKTKHQTKVHRKTLNPIFDEVFLFPVAYG----E 302

  Fly   273 LQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQG--RGEL 335
            |....|||.:..|||:||.||||:||.. ..:::.|..:|. .:.::|    |.:.|..  .|:|
Zfish   303 LPTRKLHFSVYDFDRFSRHDVIGQVVVD-NFLDLPDFPQET-RLCRDI----LYVSADNVDLGDL 361

  Fly   336 LISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNE 400
            :.|||:.|.|||||:.::|||||..||:||.:|||||:.|:.:|:|:.|:||..|:.||:||:||
Zfish   362 MFSLCYLPTAGRLTITIIKARNLKAMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNE 426

  Fly   401 SFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQ 465
            :..||:|.     .:::.:||.:.::|:|||..|||||...:|. .:.|...:||||:...||:.
Zfish   427 AIVFDVPP-----ENIDQISLLIAVMDYDRVGHNEVIGICHVGN-RAPSLGRDHWNEMLTYPRKP 485

  Fly   466 IAEWHKLNE 474
            ||.||:|.|
Zfish   486 IARWHQLVE 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 52/145 (36%)
C2B_Synaptotagmin-4 332..473 CDD:176049 64/140 (46%)
syt9bNP_001003985.1 C2 226..350 CDD:301316 53/151 (35%)
C2B_Synaptotagmin-3-5-6-9-10 359..492 CDD:176048 64/138 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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