DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt1a

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001314758.1 Gene:syt1a / 436736 ZFINID:ZDB-GENE-040718-165 Length:419 Species:Danio rerio


Alignment Length:434 Identity:137/434 - (31%)
Similarity:215/434 - (49%) Gaps:101/434 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 SPIAQPNV---KYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSP------------- 147
            :|.|.|.|   .....|.||.:..::....         :|:...|.||..|             
Zfish    12 APTAAPEVPGNSTEAAGPGPRETKDEMFSK---------VKNKFMNELHKIPLPSWAIVAIAFVA 67

  Fly   148 ----------------------------------VETIANGSVTITLDDH-----SLTNGKELTV 173
                                              ::.:.:|..|..|.|.     .||:.::...
Zfish    68 VVLVVSCCFCICKKWIFKKKNKKKGKDKGKNAINMKDVKDGIKTEALKDEDDAETGLTDTEKEVE 132

  Fly   174 TDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPC--KGGSSGTGDIPTGMNGRTQAATDPYVKL 236
            ..:..|||.:.:.:.|....|.|:|.||:...||.  .||:|                 |||||:
Zfish   133 PKEEEKLGKLQYSMDYNFTENTLIVGIIQAAELPAMDMGGTS-----------------DPYVKV 180

  Fly   237 QLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPL 301
            .|||||:.|.:|:|.|.|.|||::|.||| .:...:|...:|...:..|||:|:.|.||:|..|:
Zfish   181 YLLPDKKKKFETKVHRKTLNPVFNEQFTF-KVPYTELGGKTLVMTVYDFDRFSKHDAIGDVKVPM 244

  Fly   302 TSIEIGDISKE---ALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDV 363
            ..::...:::|   ..|..||.|.:        .|::..||.:.|.||:||||:|:|:||.:|||
Zfish   245 NKVDFSHVTEEWRDLQSAEKEEQEK--------LGDICFSLRYVPTAGKLTVVVLEAKNLKKMDV 301

  Fly   364 TGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDW 428
            .||:||||||:|:.||:|:.||||.:||.||:|.:||||:|::|..:     ::.|.:.:.:||:
Zfish   302 GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQ-----IQKVQVVITVLDY 361

  Fly   429 DRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            |::.||:.||::.: |.||:.|.|.||:::..:|||.||:||.|
Zfish   362 DKIGKNDAIGKVFV-GLNSTGTELRHWSDMLANPRRPIAQWHVL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 51/147 (35%)
C2B_Synaptotagmin-4 332..473 CDD:176049 67/141 (48%)
syt1aNP_001314758.1 Syt1_N 4..111 CDD:409248 13/107 (12%)
C2A_Synaptotagmin-1-5-6-9-10 139..261 CDD:176031 47/139 (34%)
C2B_Synaptotagmin-1 270..405 CDD:176047 67/141 (48%)

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