DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt1a

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001314758.1 Gene:syt1a / 436736 ZFINID:ZDB-GENE-040718-165 Length:419 Species:Danio rerio


Alignment Length:434 Identity:137/434 - (31%)
Similarity:215/434 - (49%) Gaps:101/434 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 SPIAQPNV---KYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSP------------- 147
            :|.|.|.|   .....|.||.:..::....         :|:...|.||..|             
Zfish    12 APTAAPEVPGNSTEAAGPGPRETKDEMFSK---------VKNKFMNELHKIPLPSWAIVAIAFVA 67

  Fly   148 ----------------------------------VETIANGSVTITLDDH-----SLTNGKELTV 173
                                              ::.:.:|..|..|.|.     .||:.::...
Zfish    68 VVLVVSCCFCICKKWIFKKKNKKKGKDKGKNAINMKDVKDGIKTEALKDEDDAETGLTDTEKEVE 132

  Fly   174 TDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPC--KGGSSGTGDIPTGMNGRTQAATDPYVKL 236
            ..:..|||.:.:.:.|....|.|:|.||:...||.  .||:|                 |||||:
Zfish   133 PKEEEKLGKLQYSMDYNFTENTLIVGIIQAAELPAMDMGGTS-----------------DPYVKV 180

  Fly   237 QLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPL 301
            .|||||:.|.:|:|.|.|.|||::|.||| .:...:|...:|...:..|||:|:.|.||:|..|:
Zfish   181 YLLPDKKKKFETKVHRKTLNPVFNEQFTF-KVPYTELGGKTLVMTVYDFDRFSKHDAIGDVKVPM 244

  Fly   302 TSIEIGDISKE---ALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDV 363
            ..::...:::|   ..|..||.|.:        .|::..||.:.|.||:||||:|:|:||.:|||
Zfish   245 NKVDFSHVTEEWRDLQSAEKEEQEK--------LGDICFSLRYVPTAGKLTVVVLEAKNLKKMDV 301

  Fly   364 TGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDW 428
            .||:||||||:|:.||:|:.||||.:||.||:|.:||||:|::|..:     ::.|.:.:.:||:
Zfish   302 GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQ-----IQKVQVVITVLDY 361

  Fly   429 DRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            |::.||:.||::.: |.||:.|.|.||:::..:|||.||:||.|
Zfish   362 DKIGKNDAIGKVFV-GLNSTGTELRHWSDMLANPRRPIAQWHVL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 51/147 (35%)
C2B_Synaptotagmin-4 332..473 CDD:176049 67/141 (48%)
syt1aNP_001314758.1 C2A_Synaptotagmin-1-5-6-9-10 139..261 CDD:176031 47/139 (34%)
C2B_Synaptotagmin-1 270..405 CDD:176047 67/141 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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