DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt11a

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_998625.2 Gene:syt11a / 406769 ZFINID:ZDB-GENE-040426-2815 Length:451 Species:Danio rerio


Alignment Length:501 Identity:184/501 - (36%)
Similarity:265/501 - (52%) Gaps:104/501 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IVPAILGLTAAAVL---SSVACI---CARQMRLRNKKQSQHDASFPFQPTRRPTAVRSPSGQPP- 72
            :.|.:.|...|.||   .:||..   |. |.|.|....:....|.|:.|   |.       .|| 
Zfish    13 VSPVLAGFLGAGVLVVSVTVAVFLWTCC-QRRYRQMTGAYKLTSGPYDP---PV-------DPPY 66

  Fly    73 ---HYLKKSPSPTGGKQMGL-LSPMQDQSTSPIAQ------PNVKYSEEGDGPAQHAEQQNGNQL 127
               |.||           |: :.|....::..|.:      .|....|.|.|      .:||:.|
Zfish    67 KFIHMLK-----------GISIYPETLSNSKKIVRVGRRSASNSLLREWGRG------SRNGDVL 114

  Fly   128 TVVDGNGLKHSLHNSLHH-------------SPVET------IANGSVTITLDDHSLTNGKELTV 173
             :||.:....:.|..::|             .|:..      .::||   :.:.||.|       
Zfish   115 -LVDADPECGTTHLQMNHLVPPVGPPRLERALPIRADYCCMESSSGS---SSEAHSKT------- 168

  Fly   174 TDQYG----KLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYV 234
            ...|.    .|||:...:.|...:.||:|:||..:|||.....:|              ::||||
Zfish   169 ASPYSLNSPSLGTLSLAIDYNFPKKALVVTIIGAQGLPAVDEQAG--------------SSDPYV 219

  Fly   235 KLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVC 299
            |:.:||:|:|:|||||:|.|..||:||.|||||:..:.|..::|||::|||||::|||||||.|.
Zfish   220 KMTILPEKKHRVKTRVLRKTLEPVFDETFTFYGVPYSSLPELTLHFLVLSFDRFARDDVIGEAVV 284

  Fly   300 PLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVT 364
            ||..:   |.|.....|:::|..|:  .:.:.|||||:||.:.|...||.||:|||::||.||:|
Zfish   285 PLEGV---DPSTGRAHITQQISKRN--TQCESRGELLVSLSYHPVTHRLNVVVLKAKHLPTMDIT 344

  Fly   365 GLA-DPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDW 428
            ||: :||||:.:.|..:|||||||||||.||:|||||||.:|:||     ..:..:|:|.:::|:
Zfish   345 GLSGNPYVKVNVFYGRKRIAKKKTHVKKCTLNPVFNESFIYDVPA-----ELMPDISVEFLVIDF 404

  Fly   429 DRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLNE 474
            ||.|||||:|||.|||.:...:.:.||.|||::||||||:||.|.|
Zfish   405 DRTTKNEVVGRLVLGGQSPIPSGVTHWREVCDNPRRQIAKWHNLIE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 61/142 (43%)
C2B_Synaptotagmin-4 332..473 CDD:176049 79/141 (56%)
syt11aNP_998625.2 C2 179..290 CDD:301316 57/127 (45%)
C2B_Synaptotagmin-4 312..449 CDD:176049 79/141 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I5922
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 277 1.000 Inparanoid score I2902
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D329810at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 1 1.000 - - otm26157
orthoMCL 1 0.900 - - OOG6_106708
Panther 1 1.100 - - LDO PTHR10024
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9815
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

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