DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and tcb1

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_587865.1 Gene:tcb1 / 2539288 PomBaseID:SPCC962.01 Length:1429 Species:Schizosaccharomyces pombe


Alignment Length:393 Identity:87/393 - (22%)
Similarity:149/393 - (37%) Gaps:110/393 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 NQLTVVDGNG----------------LKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTV 173
            |.||:....|                |:.:..||...|.....:....|....|:|.:|.:..::
pombe   870 NALTLTSRKGQSVRGTISVNCDYRPCLRLNTDNSSKQSSENVQSATDPTTPAKDNSTSNAETSSI 934

  Fly   174 TDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQL 238
            |    .:.::...|:|  .....::||:          |:...|:...:...|..|..|::    
pombe   935 T----SVISVNEALQY--PSGFALISIV----------SADLQDVGVDLRVFTDNAAFPFI---- 979

  Fly   239 LPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNM-NDLQNMSLHFVILSFDRYSRDDVIGEVVCPLT 302
                     |..:..|:.|.:..    :|::| .:||.....|.:.  |...:|.   :|||. .
pombe   980 ---------TTPIAKTKTPRWSS----FGISMVRELQFSETTFQLT--DGAKKDP---KVVCE-H 1025

  Fly   303 SIEIGDISKEALSISKEIQPRSLKIRAQGRGEL---LISLCWQPA------------AGRLTVVL 352
            |::..|:..|||.     :|.|::|.. ..|:|   .:|:.:.|.            :|.|..:|
pombe  1026 SVKTLDLVSEALG-----RPYSVEIPG-SNGQLNHVRLSITYMPVPMTLNPMESYINSGSLHFML 1084

  Fly   353 LKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNE-------SFAFDIPAAE 410
            ...:|||..|:.. :||:|.:.|  ||:...|.|  |.|:.|:||:||       :...|:    
pombe  1085 QDGQNLPIGDIRS-SDPFVVLKL--NGESAFKSK--VIKKNLNPVWNEEADIVVQNRVLDV---- 1140

  Fly   411 GAGASLEGVSLELMLLDWDRVTKNEVIG-------RLELGGPNSSSTALNHWNEVCNSPRRQIAE 468
                      |||:..|||...|.:|:|       .||....:..|..|:......|:..|.:..
pombe  1141 ----------LELVCYDWDMGEKPDVLGTSNIDLLSLEPNVESQQSIKLDSKTGTINASLRFVPG 1195

  Fly   469 WHK 471
            ||:
pombe  1196 WHR 1198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 27/143 (19%)
C2B_Synaptotagmin-4 332..473 CDD:176049 44/169 (26%)
tcb1NP_587865.1 COG5038 45..1275 CDD:227371 87/393 (22%)
C2 1332..>1373 CDD:472691
Blue background indicates that the domain is not in the aligned region.

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