DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and Syt3

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_057872.3 Gene:Syt3 / 20981 MGIID:99665 Length:587 Species:Mus musculus


Alignment Length:485 Identity:154/485 - (31%)
Similarity:220/485 - (45%) Gaps:93/485 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PDASVMDTIVPAILGLTAAAVLSSVACICARQMRLRNKKQSQHDASFPFQ----------PTRRP 61
            |:.|.:|     :.....|||.|.||.         ..|.||.....|.:          |   |
Mouse   158 PEPSYLD-----MDSYPEAAVASVVAA---------GVKPSQTSPELPSEGGTGSGLLLLP---P 205

  Fly    62 TAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQ 126
            :....||.| .|....|.:|| .:...|..|:..|:.:..|.|    |.|...||.......|.:
Mouse   206 SGGGLPSAQ-SHQQVTSLAPT-TRYPALPRPLTQQTLTTQADP----STEERPPALPLPLPGGEE 264

  Fly   127 LTVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLA 191
            ...:.|. :|..|:...  .|......||                  .:.....|.|.|.||||.
Mouse   265 KAKLIGQ-IKPELYQGT--GPGGRRGGGS------------------GEAGAPCGRISFALRYLY 308

  Fly   192 ERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRN 256
            ..:.|:|.|::...||.|..           ||    .:|||||:.||||::.|.:|:|.|.|.|
Mouse   309 GSDQLVVRILQALDLPAKDS-----------NG----FSDPYVKIYLLPDRKKKFQTKVHRKTLN 358

  Fly   257 PVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQ 321
            |:::|.|.| .:.:.:|....|||.:..|||:||.|:||:||.           ...|.::::..
Mouse   359 PIFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVL-----------DNLLELAEQPP 411

  Fly   322 PRSL--KIRAQGR-----GELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNG 379
            .|.|  .|...|.     |||..|||:.|.||||||.::||.||..||:||.:|||||..|:..|
Mouse   412 DRPLWRDILEGGSEKADLGELNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFSDPYVKASLISEG 476

  Fly   380 QRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGG 444
            :|:.|:||.:||.||:|.:||:..||:     |..|:|.|.|.:.::|:|.:..|||||...:|.
Mouse   477 RRLKKRKTSIKKNTLNPTYNEALVFDV-----APESVENVGLSIAVVDYDCIGHNEVIGVCRVGP 536

  Fly   445 PNSSSTALNHWNEVCNSPRRQIAEWHKLNE 474
            ..:......||.|:..:||:.:..||:|.|
Mouse   537 EAADPHGREHWAEMLANPRKPVEHWHQLVE 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 49/142 (35%)
C2B_Synaptotagmin-4 332..473 CDD:176049 61/145 (42%)
Syt3NP_057872.3 Cysteine motif. /evidence=ECO:0000269|PubMed:10531343 10..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..258 21/83 (25%)
C2A_Synaptotagmin-1-5-6-9-10 297..421 CDD:176031 52/150 (35%)
C2B_Synaptotagmin-3-5-6-9-10 430..564 CDD:176048 61/138 (44%)
Blue background indicates that the domain is not in the aligned region.

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