DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and snt-2

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_497261.2 Gene:snt-2 / 185680 WormBaseID:WBGene00004922 Length:369 Species:Caenorhabditis elegans


Alignment Length:364 Identity:121/364 - (33%)
Similarity:191/364 - (52%) Gaps:65/364 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 NSLHHSPVET-IANGSVTITLDDHSLTNGKELTV----TDQY-------------GKL----GTI 183
            |..|..|... |.||:|.|       .:.|.:||    :|.|             |.|    |.|
 Worm    30 NGYHPRPKHVDIGNGAVPI-------LSSKPITVQPTNSDYYEPVNNGTLPLSSSGALIKQYGNI 87

  Fly   184 YFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKT 248
            :|::.|..|::.|.|:|:....||.           ...||    .:|||||:.:||:::.|.:|
 Worm    88 HFRVEYDFEQSKLSVTIVSASDLPA-----------MDRNG----MSDPYVKVYVLPERKQKFET 137

  Fly   249 RVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIG---DIS 310
            |::|||.||.|:|.|.| .:..|:|.:.:|..|:..:||.|:||.:|::..||.||:.|   ||.
 Worm   138 RIIRNTLNPTYNETFQF-SIPFNELHSKTLMLVVYDYDRLSKDDKMGQLSVPLESIDFGITTDIE 201

  Fly   311 KEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYL 375
            :......|: ..:..::     |::..|..::||.|.:|:.:::||||.:|||.|.:||||||||
 Worm   202 RPLQKPEKD-DEKECRL-----GDICFSTRYRPATGTVTLTIMEARNLKKMDVGGSSDPYVKIYL 260

  Fly   376 LYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRL 440
            .:..:.::||||..|.:||:|.:||||.|.|..     ..:|.|.|.:.:.|:|:::||:.||.:
 Worm   261 HHGRKLLSKKKTSRKYKTLNPYYNESFQFKIEP-----HMIEKVHLIVSVWDYDKMSKNDFIGEV 320

  Fly   441 ELGGPNSSSTALNH-----WNEVCNSPRRQIAEWHKLNE 474
            .||..:.:...:.|     |.|:..| ||.:.:||.|.|
 Worm   321 TLGSKHLNLPQITHACSEQWAEMMTS-RRPVVQWHTLQE 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 50/149 (34%)
C2B_Synaptotagmin-4 332..473 CDD:176049 55/145 (38%)
snt-2NP_497261.2 C2 85..206 CDD:301316 48/136 (35%)
C2B_Synaptotagmin-1 217..357 CDD:176047 55/150 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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