DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and snt-6

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001254022.1 Gene:snt-6 / 182427 WormBaseID:WBGene00004926 Length:373 Species:Caenorhabditis elegans


Alignment Length:306 Identity:103/306 - (33%)
Similarity:156/306 - (50%) Gaps:53/306 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 GTIYFKLRYLAERNALMVSIIRCRGLPCKG--GSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQ 243
            |.|.|.:.:..|.:.|.|.::....||.|.  |||                 ||||:..||.|..
 Worm   103 GRINFSVAFEKECSTLHVHLMEAVDLPVKDFTGSS-----------------DPYVRAFLLQDPG 150

  Fly   244 HKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGD 308
            ...:::|.|...||.::|..:|.|.:|..|.:|:|...::.:||:|.||.|||::.||..::...
 Worm   151 QSERSKVHRRNLNPTFNETLSFRGHSMKKLHDMTLVLQVMDYDRFSSDDPIGEILLPLKHVKFES 215

  Fly   309 ------------ISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRM 361
                        :||:|.                  ||::||||:.|.:|::||.::|||:|...
 Worm   216 SPVYWKHLQR
PTVSKDAC------------------GEIMISLCYLPTSGKITVSIIKARDLHAK 262

  Fly   362 DVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLL 426
            |.|...|.|||::::..|.::.|:||.||..|.||:|||||||.||..:   ..|..|:|.|..:
 Worm   263 DRTRHYDTYVKMWMVQQGNKLEKRKTSVKPHTPSPIFNESFAFSIPVKQ---VLLAEVNLVLTAM 324

  Fly   427 DWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            ::|.:..||.||.:.:||..|.. ...||:|..|.|.:.:|.||||
 Worm   325 EYDVIGSNEEIGHVIVGGLGSEH-GQRHWSECVNHPEQPVAMWHKL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 43/154 (28%)
C2B_Synaptotagmin-4 332..473 CDD:176049 60/141 (43%)
snt-6NP_001254022.1 C2 101..225 CDD:472691 40/138 (29%)
C2B_Synaptotagmin 234..369 CDD:175975 58/138 (42%)

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