DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and snt-6

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001254022.1 Gene:snt-6 / 182427 WormBaseID:WBGene00004926 Length:373 Species:Caenorhabditis elegans


Alignment Length:306 Identity:103/306 - (33%)
Similarity:156/306 - (50%) Gaps:53/306 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 GTIYFKLRYLAERNALMVSIIRCRGLPCKG--GSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQ 243
            |.|.|.:.:..|.:.|.|.::....||.|.  |||                 ||||:..||.|..
 Worm   103 GRINFSVAFEKECSTLHVHLMEAVDLPVKDFTGSS-----------------DPYVRAFLLQDPG 150

  Fly   244 HKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGD 308
            ...:::|.|...||.::|..:|.|.:|..|.:|:|...::.:||:|.||.|||::.||..::...
 Worm   151 QSERSKVHRRNLNPTFNETLSFRGHSMKKLHDMTLVLQVMDYDRFSSDDPIGEILLPLKHVKFES 215

  Fly   309 ------------ISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRM 361
                        :||:|.                  ||::||||:.|.:|::||.::|||:|...
 Worm   216 SPVYWKHLQR
PTVSKDAC------------------GEIMISLCYLPTSGKITVSIIKARDLHAK 262

  Fly   362 DVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLL 426
            |.|...|.|||::::..|.::.|:||.||..|.||:|||||||.||..:   ..|..|:|.|..:
 Worm   263 DRTRHYDTYVKMWMVQQGNKLEKRKTSVKPHTPSPIFNESFAFSIPVKQ---VLLAEVNLVLTAM 324

  Fly   427 DWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            ::|.:..||.||.:.:||..|.. ...||:|..|.|.:.:|.||||
 Worm   325 EYDVIGSNEEIGHVIVGGLGSEH-GQRHWSECVNHPEQPVAMWHKL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 43/154 (28%)
C2B_Synaptotagmin-4 332..473 CDD:176049 60/141 (43%)
snt-6NP_001254022.1 C2 101..225 CDD:387358 40/138 (29%)
C2B_Synaptotagmin 234..369 CDD:175975 58/138 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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