DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and snt-7

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_510526.2 Gene:snt-7 / 181615 WormBaseID:WBGene00011682 Length:416 Species:Caenorhabditis elegans


Alignment Length:279 Identity:69/279 - (24%)
Similarity:126/279 - (45%) Gaps:42/279 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 SLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIR 202
            |:.::||.:..:   .|.......|.|..:...::.      :|:|...:.:....|.|.|:|::
 Worm   111 SMFSNLHQNQFD---RGLYQFPTGDESACSSVTMSA------VGSIQLSVSHDVNLNLLTVTIVK 166

  Fly   203 CRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQL-LPDKQ-----HKVKTRVVRNTRNPVYDE 261
            ...||.|    ...|:|           :|::|:.| :||.:     |:.||  ...|.:|:.:|
 Worm   167 AVDLPTK----REDDLP-----------NPFMKVSLEIPDSKKPNVDHQTKT--YNGTASPLINE 214

  Fly   262 DFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALS--ISKEIQPRS 324
            || ::.:....:....|..::..:|::|.|:.:|  .|.||...|.:..:..|.  ...|:.|..
 Worm   215 DF-YFSVTSQQVSICRLEVMVYDYDQFSVDECVG--YCWLTLGRINEHFEHDLPTLFWAEVLPYE 276

  Fly   325 LKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQR-IAKKKTH 388
             ....:|.|::|.:|.:...|.|||:.:.|.||:...:...:|   :::.||...:: :.||||.
 Worm   277 -DGENKGYGQVLFALSYLSHAQRLTMNIFKVRNVRFRNGGNVA---LRVTLLDGEEKPLKKKKTS 337

  Fly   389 VKKRTLSPVFNESFAFDIP 407
            :||...|..|||...|.||
 Worm   338 LKKAARSVQFNECLTFSIP 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 35/150 (23%)
C2B_Synaptotagmin-4 332..473 CDD:176049 26/77 (34%)
snt-7NP_510526.2 C2 145..257 CDD:387358 32/131 (24%)
C2 283..>374 CDD:387358 26/77 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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