DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and snt-1

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_495394.3 Gene:snt-1 / 174120 WormBaseID:WBGene00004921 Length:443 Species:Caenorhabditis elegans


Alignment Length:372 Identity:136/372 - (36%)
Similarity:202/372 - (54%) Gaps:56/372 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 GPAQHAEQQN--------GNQLTVVDG---NGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTN 167
            |..:|.|:..        |....||||   .|:...|..                  |.|....|
 Worm   101 GKKRHGEKNKKGGLKGFFGKGQDVVDGKNIQGMAQDLEE------------------LGDAMEQN 147

  Fly   168 GKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDP 232
            .||.....:..|||.|.:||.|..::..|.|::|:...||             ||:  ....:||
 Worm   148 EKEQAEEKEEVKLGRIQYKLDYDFQQGQLTVTVIQAEDLP-------------GMD--MSGTSDP 197

  Fly   233 YVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEV 297
            ||||.|||:|:.||:|:|.|.|.|||::|.|.| .:..|::...:|.|.|..|||:|:.|.||:|
 Worm   198 YVKLYLLPEKKKKVETKVHRKTLNPVFNETFIF-KVAFNEITAKTLVFAIYDFDRFSKHDQIGQV 261

  Fly   298 VCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMD 362
            :.||..|::|.:.:|...|:   .|...|...:..|::..||.:.|.||:||||:|:|:||.:||
 Worm   262 LIPLGKIDLGAVIEEWKDIA---PPPDDKEAEKSLGDICFSLRYVPTAGKLTVVILEAKNLKKMD 323

  Fly   363 VTGLADPYVKIYLL-YNGQRIAKKKTHVKKRTLSPVFNESFAFD-IPAAEGAGASLEGVSLELML 425
            |.||:|||||:.:. .:.:|:.||||::|::||:|.|||||.|| :|..:     ::.|||.:.:
 Worm   324 VGGLSDPYVKLEMFGEDRKRLKKKKTNIKRKTLNPYFNESFVFDKLPLHK-----MKKVSLMITV 383

  Fly   426 LDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            :|:|::..|:.|||..| |.|.:...|.||.::..||||.||:||.|
 Worm   384 MDYDKLGSNDAIGRCLL-GCNGTGAELRHWMDMLASPRRPIAQWHTL 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 54/142 (38%)
C2B_Synaptotagmin-4 332..473 CDD:176049 65/143 (45%)
snt-1NP_495394.3 C2A_Synaptotagmin-1-5-6-9-10 160..282 CDD:176031 53/140 (38%)
C2B_Synaptotagmin-1 293..429 CDD:176047 64/141 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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