DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and Syt12

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_598925.1 Gene:Syt12 / 171180 MGIID:2159601 Length:421 Species:Mus musculus


Alignment Length:466 Identity:117/466 - (25%)
Similarity:208/466 - (44%) Gaps:85/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LGLTAAAVLSSVACICARQMRLRNKKQSQHDASFPFQPTRRPTAVRSPSGQPPH---YL-KKSPS 80
            :|:.||..|:.:........:|..      ..|||           |||..|.:   || :|...
Mouse    21 VGVYAAGALALLGIAAVSLWKLWT------SGSFP-----------SPSPFPNYDYRYLQQKYGE 68

  Fly    81 PTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHH 145
            .....::..:.|..||.|:....|:.|.|...:...:...:....:|           :...|..
Mouse    69 AYVEAKLKRVPPWNDQRTTTRGPPSRKGSLSIEDTFESISELGPLEL-----------MGRELDL 122

  Fly   146 SPVETIANGSVTITLDDHSLTNGKELTVTDQYGK---LGTIYFKLRYLAERNALMVSIIRCRGLP 207
            :|..|:.......:|:..|       :|::.:|:   ||.:...:.|....:.|.|::::.:.| 
Mouse   123 APYGTLRKSQSADSLNSIS-------SVSNTFGQDFTLGQVEVSMDYDGASHTLHVAVLQGKDL- 179

  Fly   208 CKGGSSGTGDIPTGMNGRTQAATDP-YVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMN 271
                           ..|.:|..:. ::::.||||:|....:|:.||..:..:||.|: ..|:..
Mouse   180 ---------------LEREEATFESCFMRVSLLPDEQIVGISRIQRNAYSIFFDEKFS-VPLDPT 228

  Fly   272 DLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRS--LKIRAQGR-- 332
            .|:..||.|.:...|...|:...|.|...|:.:::            .:||.|  |.::.|.:  
Mouse   229 ALEEKSLRFSVFGIDEDERNVSTGVVELKLSVLDL------------PLQPFSGWLYLQDQNKAA 281

  Fly   333 ---GELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTL 394
               ||:|:||.:.|.|.|||||::||:||...:....|||:||:|||.:|::::||||.||:...
Mouse   282 DAVGEILLSLSYLPTAERLTVVVVKAKNLIWTNEKSTADPFVKVYLLQDGRKMSKKKTAVKRDDP 346

  Fly   395 SPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVC 459
            :|||||:..|.:||     ..|:.:||.:.:.:.....:.:.:|.:.: ||..|.....|||::.
Mouse   347 NPVFNEAMIFSVPA-----IVLQDLSLRVTVAESSSDGRGDNVGHVII-GPGVSGMGTTHWNQML 405

  Fly   460 NSPRRQIAEWH 470
            .:.||.::.||
Mouse   406 ATLRRPVSMWH 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 29/146 (20%)
C2B_Synaptotagmin-4 332..473 CDD:176049 53/144 (37%)
Syt12NP_598925.1 C2 152..263 CDD:301316 29/127 (23%)
C2B_Synaptotagmin-12 284..419 CDD:176051 53/139 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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