DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and SYT6

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001353153.1 Gene:SYT6 / 148281 HGNCID:18638 Length:528 Species:Homo sapiens


Alignment Length:496 Identity:165/496 - (33%)
Similarity:241/496 - (48%) Gaps:84/496 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PAILGL-TAAAVLSSVACICARQMRLRNKKQSQHDASFPF-------QPTRRPTAVRSPSGQPPH 73
            |:..|. |:.::|:.|..:|...:          .|.|.|       .|.|...|....|..||.
Human    49 PSAAGAGTSVSLLAVVVIVCGVAL----------VAVFLFLFWKLCWMPWRNKEASSPSSANPPL 103

  Fly    74 YLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEG-DGPAQ-------------HAEQQNG 124
            ...:|||..|    .:...::|.||....:..||.|... |.||:             ..::|..
Human   104 EALQSPSFRG----NMADKLKDPSTLGFLEAAVKISHTSPDIPAEVQMSVKEHIMRHTRLQRQTT 164

  Fly   125 NQLTVVDGNGLKHSLHNSLHHSPV-----------ETIANGSVTITLDDHSLTNGKELTVTDQYG 178
            ...:.......|..|...:|.|.|           :..:.|.:...|......:|:: ..::...
Human   165 EPASSTRHTSFKRHLPRQMHVSSVDYGNELPPAAEQPTSIGRIKPELYKQKSVDGED-AKSEATK 228

  Fly   179 KLGTIYFKLRYLAERNALMVSIIRCRGLPCKG--GSSGTGDIPTGMNGRTQAATDPYVKLQLLPD 241
            ..|.|.|.|||..|...|:|.|::...||.|.  |||                 |||||:.||||
Human   229 SCGKINFSLRYDYETETLIVRILKAFDLPAKDFCGSS-----------------DPYVKIYLLPD 276

  Fly   242 KQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEI 306
            ::.|::|||.|.|.||.:||:|.| .:...:|.:..||..:..|||:||.|:||||:.. ...|.
Human   277 RKCKLQTRVHRKTLNPTFDENFHF-PVPYEELADRKLHLSVFDFDRFSRHDMIGEVILD-NLFEA 339

  Fly   307 GDISKEALSISKEIQ---PRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLAD 368
            .|:|:|. ||.|:||   ..|:.:     ||::.|||:.|.|||||:.::|.|||..||:||.:|
Human   340 SDLSRET-SIWKDIQYATSESVDL-----GEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSD 398

  Fly   369 PYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTK 433
            ||||:.||.:|:|:.||||.:||.||:||:||:..||||.     .:::.|||.:.::|:|||..
Human   399 PYVKVSLLCDGRRLKKKKTTIKKNTLNPVYNEAIIFDIPP-----ENMDQVSLLISVMDYDRVGH 458

  Fly   434 NEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLNE 474
            ||:||...: |..:.....:||||:...||:.||.||.|.|
Human   459 NEIIGVCRV-GITAEGLGRDHWNEMLAYPRKPIAHWHSLVE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 59/147 (40%)
C2B_Synaptotagmin-4 332..473 CDD:176049 66/140 (47%)
SYT6NP_001353153.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 12..38
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..178 2/20 (10%)
C2A_Synaptotagmin-1-5-6-9-10 230..354 CDD:176031 58/143 (41%)
C2B_Synaptotagmin-3-5-6-9-10 363..496 CDD:176048 66/138 (48%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.