DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and TC2N

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001122067.2 Gene:TC2N / 123036 HGNCID:19859 Length:490 Species:Homo sapiens


Alignment Length:477 Identity:104/477 - (21%)
Similarity:186/477 - (38%) Gaps:92/477 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PTRRPTAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQS-TSPIAQPNVKYSEEGDGPAQHAE 120
            |.....:|:...|....|| .|..|:.||::..:.|....| ..|..|....:.||.:|.|:.:.
Human    44 PPLTSVSVKPQLGCTEDYL-LSKLPSDGKEVPFVVPKFKLSYIQPRTQETPSHLEELEGSARASF 107

  Fly   121 QQNGNQLTVVDGNGLKHSLHNSL----HHSP-----------VETIAN-----------GSVTIT 159
            .....:|:....:|..:.::|..    |.||           |:.:..           ||..::
Human   108 GDRKVELSSSSQHGPSYDVYNPFYMYQHISPDLSRRFPPRSEVKRLYGSVCDLRTNKLPGSPGLS 172

  Fly   160 LDDHSLTNGKE-------------------------------LTVTDQYGKLGTIYFKLRYLAER 193
            .....|||..:                               :|::......|.:..||.|.:..
Human   173 KSMFDLTNSSQRFIQRHDSLSSVPSSSSSRKNSQGSNRSLDTITLSGDERDFGRLNVKLFYNSSV 237

  Fly   194 NALMVSIIRCRGLPCKGGSSGTGDIPT-GMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNP 257
            ..:.:::::||.|   ...|..||.|| .:.|           :..||...| .|:.....:...
Human   238 EQIWITVLQCRDL---SWPSSYGDTPTVSIKG-----------ILTLPKPVH-FKSSAKEGSNAI 287

  Fly   258 VYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQP 322
            .:.|.|.| .:.:.:||.:.|.|.|.:  :..|...|||  |   |:.:..:|.:.:..|.:|.|
Human   288 EFMETFVF-AIKLQNLQTVRLVFKIQT--QTPRKKTIGE--C---SMSLRTLSTQEMDYSLDITP 344

  Fly   323 RSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKT 387
            .| || :....||.:..|:|....|:.:.:|:||.||..........:||:.:..:|:.|.||||
Human   345 PS-KI-SVCHAELELGTCFQAVNSRIQLQILEARYLPSSSTPLTLSFFVKVGMFSSGELIYKKKT 407

  Fly   388 HVKKRTLSPV-FNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTA 451
            .:.|.:...| :.|:..|.:..:|      :.:...:.|.....|.:...:|::.:...:::..|
Human   408 RLLKASNGRVKWGETMIFPLIQSE------KEIVFLIKLYSRSSVRRKHFVGQIWISEDSNNIEA 466

  Fly   452 LNHWNEVCNSPRRQIAEWHKLN 473
            :|.|.|...:|.:.:..|||||
Human   467 VNQWKETVINPEKVVIRWHKLN 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 34/143 (24%)
C2B_Synaptotagmin-4 332..473 CDD:176049 34/141 (24%)
TC2NNP_001122067.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..215 0/25 (0%)
C2A_Tac2-N 240..342 CDD:176066 29/124 (23%)
C2B_Tac2-N 353..487 CDD:176074 33/139 (24%)
Nuclear localization signal. /evidence=ECO:0000255 447..449 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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