DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and doc2a

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_031748920.1 Gene:doc2a / 101730387 XenbaseID:XB-GENE-922476 Length:391 Species:Xenopus tropicalis


Alignment Length:408 Identity:121/408 - (29%)
Similarity:185/408 - (45%) Gaps:88/408 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSPVETIANGS 155
            ||..:::.||...|                                |:|      ||::....|:
 Frog    40 SPWPERTPSPTGNP--------------------------------HNL------SPLDIPPCGA 66

  Fly   156 VTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPT 220
            .  |.||.:..:..:   :|:...|||:.|.|.|..|:..|...|:|.:||.           |.
 Frog    67 E--TADDSADVDNYD---SDESTALGTLEFDLLYDPEQCILQCCILRAKGLK-----------PM 115

  Fly   221 GMNGRTQAATDPYVKLQLLPD--KQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVIL 283
            ..||    ..|||||:.|||.  |.:|:|||.|||:.||.::|..|:.|:...|:....|...:.
 Frog   116 DFNG----LADPYVKIHLLPGACKANKLKTRTVRNSLNPTWNESLTYCGITQEDMGKKILRISVC 176

  Fly   284 SFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEI---QPRSLKIRAQG-------------- 331
            ..|:.|.::.|||...||..::.|:.....|.:.::|   .|.|:....:|              
 Frog   177 DEDKLSHNEFIGETRVPLRRLKPGERKHFNLCLERQIPLASPSSMTAALRGISCYLKELERCQEW 241

  Fly   332 ----RGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKR 392
                ||.:|:||.:....|.|.|.:::..:|..|||.|.:|||||.||..:.::.:|.||.|||:
 Frog   242 ELEERGRILLSLTYSSERGGLVVGIMRCAHLAAMDVNGFSDPYVKTYLKPDVEKKSKHKTVVKKK 306

  Fly   393 TLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNE 457
            ||:|.|||.|.::|...|     |:..|||:.:.|:|....|:.||.:.. |.:|....|.||.|
 Frog   307 TLNPEFNEEFFYNISQLE-----LQKRSLEVTVWDYDLGKSNDFIGGVTF-GMSSKGECLKHWME 365

  Fly   458 VCNSPRRQIAEWHKL-NE 474
            ..::|.::...||.| ||
 Frog   366 CLSTPNKRTEHWHTLTNE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 48/147 (33%)
C2B_Synaptotagmin-4 332..473 CDD:176049 54/141 (38%)
doc2aXP_031748920.1 C2A_Rabphilin_Doc2 86..209 CDD:176000 47/137 (34%)
C2 248..380 CDD:417471 51/137 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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