DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and fam81b

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_031749265.1 Gene:fam81b / 100498576 XenbaseID:XB-GENE-6042474 Length:385 Species:Xenopus tropicalis


Alignment Length:311 Identity:60/311 - (19%)
Similarity:105/311 - (33%) Gaps:115/311 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 VKYSEEGDG--PAQHAEQQNG----------------NQ-LTVVDGNGLKHSLHNS--------L 143
            |.||:.|..  ||.|..:.:|                || ..:.|.......||.|        |
 Frog    10 VPYSDRGQPFLPAIHMNRVDGLEGRLFNQEKTTNILLNQAFKLKDDVSSLRGLHGSHWDTVAQRL 74

  Fly   144 HHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPC 208
            ..:.::|:|.....::.|..:|.|  ::...||. ..||.| .::.|.:|:...:..:|.|...|
 Frog    75 LENHMQTMAQIVKQLSKDIETLEN--QIRDRDQV-STGTSY-AVQNLDKRHLYGIGDLRGRVARC 135

  Fly   209 KGG-SSGTGD---------------------------------------IPTGMN---------- 223
            ... :..:||                                       :||.|.          
 Frog   136 DASIAKLSGDLANTKHELQAQEKEIRSINASLETHMKESDFKVCVWLECLPTAMKLYHPKVMQLL 200

  Fly   224 GRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDE----DFTFYGLNMNDLQNMSLHFVILS 284
            |:.:|:         :.::.:|||     :.:...:.|    ||...|| :||:|..     |.:
 Frog   201 GKMEAS---------ISEQNNKVK-----SAQGEQHHEIQLLDFKLGGL-LNDIQGQ-----IQN 245

  Fly   285 FDRYSRDDVIGEVVCPLTSIE--IG------DISKEALSISKEIQPRSLKI 327
            ..|::...:.........|:|  :|      |||::.|  ...||..::|:
 Frog   246 HRRWTESQIQKSSQEQAHSLEQLLGAIQQKMDISEKRL--QDNIQHLTIKV 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 36/204 (18%)
C2B_Synaptotagmin-4 332..473 CDD:176049
fam81bXP_031749265.1 SMC_prok_B <86..385 CDD:274008 43/235 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.