DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and mctp2

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_031755096.1 Gene:mctp2 / 100498038 XenbaseID:XB-GENE-983153 Length:899 Species:Xenopus tropicalis


Alignment Length:437 Identity:93/437 - (21%)
Similarity:153/437 - (35%) Gaps:168/437 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 SPTGGK----QMGLLSPMQDQSTSPIAQPNVKYSEEGDGPA-QHAEQQNGNQLTVVDGNGLKHSL 139
            ||:|.|    :..:|..:|.:..             ||.|: |..|:::|:    :|   |..||
 Frog   125 SPSGPKKDTCEDNILDLLQKECL-------------GDDPSDQKPEERSGS----ID---LNSSL 169

  Fly   140 HNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCR 204
            .:.|                        ..||:..:.|..|.|:...|.||     |.:.:...|
 Frog   170 ASQL------------------------SAELSGLENYESLSTLPSLLSYL-----LTIHLKEGR 205

  Fly   205 GLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLN 269
            .|..: ..|||              :|||||.:|  :|:...|::|:....|||:||.|..    
 Frog   206 NLVIR-DRSGT--------------SDPYVKFKL--NKKTLYKSKVIYKNLNPVWDETFVL---- 249

  Fly   270 MNDLQNMSLHFVILSFDR-YSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLK------- 326
              .:|::.....|..:|| .:.||.:|.....|..:|:...:::...:.   .|.||:       
 Frog   250 --PIQSLDQKLHIKVYDRDLTTDDFMGSAFLELQDLELNKTTEKVFHLE---DPNSLEEDMGIIM 309

  Fly   327 ------IRAQ-----GRGE------------------------------LLISLCWQPAA----- 345
                  ||.:     ||..                              ...||...|.|     
 Frog   310 ADVSLSIRRRDPKDTGRSSRRRLGASKTDLYRRNRLWFECRNSTFSSSLTTTSLQGVPVAESLRK 374

  Fly   346 -----GRLTVVLLKARNLPRMDVTGLA-DPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAF 404
                 |.:::.||:.|||..    ||. |.:|:..|   |.:..:.||..|  :.:|.:.|.|.|
 Frog   375 NQLWNGTVSITLLEGRNLSE----GLTLDSFVRFKL---GDQKYRSKTLCK--SANPQWREHFDF 430

  Fly   405 DIPAAEGAGASLEGVSLELMLLD---W--DRVTKNEVIG--RLELGG 444
            ..            .|.::.:||   |  |.....|::|  ::::.|
 Frog   431 HY------------FSDKMGILDIEVWGKDNRKHEELVGMCKVDIAG 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 35/143 (24%)
C2B_Synaptotagmin-4 332..473 CDD:176049 32/161 (20%)
mctp2XP_031755096.1 C2A_MCTP_PRT 198..315 CDD:176007 32/142 (23%)
C2B_MCTP_PRT 382..493 CDD:176022 26/105 (25%)
C2C_MCTP_PRT 533..651 CDD:176023
PRT_C <782..>847 CDD:337028
Blue background indicates that the domain is not in the aligned region.

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