DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and LOC100496007

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_004916551.1 Gene:LOC100496007 / 100496007 XenbaseID:XB-GENE-29082935 Length:380 Species:Xenopus tropicalis


Alignment Length:211 Identity:48/211 - (22%)
Similarity:82/211 - (38%) Gaps:51/211 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSPVETIANGSVTIT 159
            |:.||..:.|.|......|. |||...|:...|.|......|.|                  |:|
 Frog   217 DEDTSADSSPCVTRRPSYDW-AQHLSTQSNIGLLVSFSQLAKDS------------------TVT 262

  Fly   160 LDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNG 224
            ||     .|..|.::.:| :...:..::| |.....|..|.:..:.:.|.               
 Frog   263 LD-----TGGILRLSSEY-RSECMRLRIR-LVSAEGLYKSSVDSKNISCS--------------- 305

  Fly   225 RTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYS 289
                     :.:.::|.|..|.|:.::|.:|||:::|||.|.|:..:||....|....|:...|.
 Frog   306 ---------ISISIVPGKNQKQKSTLIRGSRNPIFNEDFFFEGMEPHDLFQKILKLKALNRTSYV 361

  Fly   290 -RDDVIGEVVCPLTSI 304
             :::|:|:....|.|:
 Frog   362 WKENVLGKSKVQLVSV 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 27/127 (21%)
C2B_Synaptotagmin-4 332..473 CDD:176049
LOC100496007XP_004916551.1 C2 <312..374 CDD:472691 20/61 (33%)
Blue background indicates that the domain is not in the aligned region.

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