DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and sytl5

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_012813070.1 Gene:sytl5 / 100496000 XenbaseID:XB-GENE-982310 Length:814 Species:Xenopus tropicalis


Alignment Length:489 Identity:117/489 - (23%)
Similarity:185/489 - (37%) Gaps:127/489 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ICARQMRLRNKKQSQHDASFPF-QPTRRPTAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQS 97
            :.:|......:.:|::|.|..| :..:...::||.|  .|.||.|.|....              
 Frog   375 VISRASLSSEQSKSEYDLSGHFTEENQESISMRSIS--VPDYLNKDPEYID-------------- 423

  Fly    98 TSPIAQPNVKYSEEGD--GP---------AQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSPVETI 151
                     |..|:.|  ||         |.....:....|.|.|.:.                 
 Frog   424 ---------KIDEDFDDLGPSTNLTKSMNAHTLSDRKWTHLNVPDADA----------------- 462

  Fly   152 ANGSVTITLDDHSLTNGKELTVTDQYGKL---GTIYFKLRYLAERNALMVSIIRCRGLPCKGGSS 213
                     |..|||:....:.|..||.|   |.|...:.|..:..||.|.:..||.|       
 Frog   463 ---------DTRSLTSISLYSETGDYGNLRITGEILLNINYSYKTGALNVVVKNCRNL------- 511

  Fly   214 GTGDIPTGMNGRTQAATDPYVKLQLLPDK--QHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNM 276
                   .:....:..||||||..|||||  |.|.||::..||.:|.::|... |.::...|:..
 Frog   512 -------AVADEKKNRTDPYVKAYLLPDKSRQSKRKTKIKTNTTDPDFNETLK-YVISHTQLETR 568

  Fly   277 SLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPR---SLKIRAQGRGELLIS 338
            :|...:...||:.|:..:|||..||.|....:...|..    ::||:   :..:..|.:||:.:.
 Frog   569 TLQLTVWHNDRFGRNSFLGEVDIPLDSCNFENQEDECF----QLQPKMDLASDVTLQYKGEITVG 629

  Fly   339 LCW-----------------------------QPAAGRLTVVLLKARNLPRMDVTGLADPYVKIY 374
            |.:                             .|:.|.:.|::..|:||..|...|.:|.:||.|
 Frog   630 LRYITPEKNLTLPLDKVAEKKSFRKSKKANVKVPSGGLVEVLIKNAKNLTAMKSGGSSDTFVKGY 694

  Fly   375 LLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGR 439
            ||.:..:..|.||.|.|:|::|.:|.:|.|    |....:.|..|.:||.:...:.:|.|..:|.
 Frog   695 LLPDNNKSTKHKTPVVKKTVNPEWNHTFTF----ASLQTSDLSNVCVELTVWGKESLTSNVFLGG 755

  Fly   440 LELG-GPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            :.|| |...|...:..|   .:|...:...|.|:
 Frog   756 VCLGCGSGVSYGDIVDW---MDSHGEEQFLWQKM 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 42/147 (29%)
C2B_Synaptotagmin-4 332..473 CDD:176049 43/171 (25%)
sytl5XP_012813070.1 PHD_SF 11..123 CDD:473978
FYVE_Slp5 65..111 CDD:277305
C2A_SLP-4_5 485..609 CDD:175995 41/142 (29%)
C2B_SLP_1-2-3-4 623..801 CDD:175987 43/171 (25%)
Blue background indicates that the domain is not in the aligned region.

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