DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt13

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_031756290.1 Gene:syt13 / 100494466 -ID:- Length:450 Species:Xenopus tropicalis


Alignment Length:467 Identity:122/467 - (26%)
Similarity:190/467 - (40%) Gaps:111/467 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ICAR-QMRLRNKKQSQHDASFPFQPTRRP--------TAVRSPSGQ---PPHYLKKSPSPT-GGK 85
            |||| ....||       .:.|....|.|        |.:..|..:   |..|..|.|.|| ||.
 Frog    67 ICARLAWHSRN-------LASPIGTDRLPEQMSIYKCTELVHPQAKLRFPYIYRSKEPCPTLGGD 124

  Fly    86 QMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQH-AEQQNG--NQLTVVDGNGLKHSLHNSLHHSP 147
            :         :.||...:.......|..|..:. :|:.|.  |:.::...|..:.....||:|.|
 Frog   125 K---------EETSKENKDEKSGETEPQGKVETISEKINSEKNEESLAPENEYEEKFSQSLNHIP 180

  Fly   148 VETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLP-CKGG 211
                                              .:.:.|.|..::..|.||.:...|.| .|..
 Frog   181 ----------------------------------KLRYSLGYDHQKRELCVSFLEAVGCPLTKEE 211

  Fly   212 SSGT-----GDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMN 271
            .||:     |.: |...|:|:|                  :|.::..|.:.|:||...| .|:..
 Frog   212 DSGSHSYIVGTL-TSNGGQTEA------------------QTSLMNRTPHTVWDEALLF-PLSEE 256

  Fly   272 DLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELL 336
            :.....|...:...|||||..|.||:...|.::.:      ....::.:..|..:...:|.||:|
 Frog   257 ERVEAELTLTLRHCDRYSRHQVAGEITLSLANLGV------PFGAARWVDLRPPEKELEGSGEVL 315

  Fly   337 ISLCWQPAAGRLTVVLLKARNLPRMDVTGL--ADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFN 399
            :||.:.|||.||.||::||||:.......|  .|..:|:.|.:..|::.||:|...|..::||:|
 Frog   316 LSLSYLPAASRLIVVVIKARNIHCDQYNNLLGKDLSIKVILKHQSQKLKKKQTKRTKHMINPVWN 380

  Fly   400 ESFAFDIPAAEGAGASLEG---VSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNS 461
            |...|::|      ..|.|   |.|:::.:..|| :.|.::|...||. ..:.|..|||.|:.|:
 Frog   381 EMVMFEVP------QELLGDVYVELQMVCVKPDR-SGNHILGTCNLGA-EWTGTGKNHWLEMMNN 437

  Fly   462 PRRQIAEWHKLN 473
            ||||||.||:||
 Frog   438 PRRQIAFWHRLN 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 32/148 (22%)
C2B_Synaptotagmin-4 332..473 CDD:176049 55/145 (38%)
syt13XP_031756290.1 PHA02644 <126..175 CDD:165026 8/48 (17%)
C2 180..301 CDD:417471 33/180 (18%)
C2 311..448 CDD:417471 55/144 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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