DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt14

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_012817119.1 Gene:syt14 / 100491102 XenbaseID:XB-GENE-985615 Length:793 Species:Xenopus tropicalis


Alignment Length:412 Identity:99/412 - (24%)
Similarity:177/412 - (42%) Gaps:52/412 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVV----DGNGLKHSLHNSLHHSPVETIA 152
            |.||.|.||  :.:...||.||...:.:...|..:.:..    :|: :.|...:..:....|.:.
 Frog   404 PYQDDSGSP--RLSCTPSEIGDSKCELSRCSNSPRYSFTKCPSEGS-MGHEAESFQNKGYEEDVP 465

  Fly   153 NGSVTITLDDHSLTNGKELTVTDQY-----GKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGS 212
            :.|..:...:.....|....:...:     .|.||:.....|.::...|:|::            
 Frog   466 SDSTAVLSPEDMSARGSSSQLPKSFDPEPVAKYGTLDVTFDYDSQEQKLLVTV------------ 518

  Fly   213 SGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMS 277
            :...|:||  :.||.......|.|.|||.|:.:.||.|.|.. .|.:.|.|.|..:....:.|.:
 Frog   519 TAVTDLPT--HNRTGNNNSWQVHLVLLPVKKQRAKTAVQRGP-CPAFTETFKFNHIESEMIANYA 580

  Fly   278 LHFVILSFDRYSRDDVIGEVVCPLTSIEI-GDIS-----KEALSIS--------KEI----QPRS 324
            :.|.:....|..::.::||.:..||.:.: |.:|     :.|.|:|        .|:    ...|
 Frog   581 VRFRLYLVRRMKKERMVGEKIFYLTKLNLQGKLSLPVVLEPAYSLSGCDSQMSMSEMSCTESTSS 645

  Fly   325 LKIRAQGR-GELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYN-GQRIAKKKT 387
            .:....|. .|:||.|.:....|||:..::|..:...:......:.|||:.|:.: ||.::|.||
 Frog   646 CQSLVHGSVPEILIGLLYNATTGRLSAEVIKGSHFKNLSANRPPNTYVKLTLMNSMGQEMSKCKT 710

  Fly   388 HVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTAL 452
            .:::...:|::.|:|.|.:     |...|..|:|.|.:.:...:.:.|:||.:.||..:|....|
 Frog   711 SIRRGQSNPLYKETFIFQV-----ALFQLSEVTLILSVYNKRSMKRKELIGWISLGLNSSGDEQL 770

  Fly   453 NHWNEVCNSPRRQIAEWHKLNE 474
            |||.|:..|..:|:..||.|.|
 Frog   771 NHWTEMKESKGQQVCRWHTLLE 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 38/160 (24%)
C2B_Synaptotagmin-4 332..473 CDD:176049 41/142 (29%)
syt14XP_012817119.1 C2A_Synaptotagmin-14_16 497..621 CDD:176035 34/138 (25%)
C2B_Synaptotagmin-14_16 654..791 CDD:176053 41/141 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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