DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt6

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_002935822.2 Gene:syt6 / 100488667 XenbaseID:XB-GENE-953252 Length:528 Species:Xenopus tropicalis


Alignment Length:506 Identity:164/506 - (32%)
Similarity:244/506 - (48%) Gaps:98/506 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PDASV-MDTIVPAILGLTAAAVLSSVACICARQMRL-----RNKKQSQHDASFPFQPTRRPTAVR 65
            ||.|| :..::..:.||...||...:.      .:|     |||       :.|..|..:..|  
 Frog    53 PDLSVSLLAVIVIVCGLALVAVFLFLF------WKLWWVPWRNK-------AVPSNPAEKQNA-- 102

  Fly    66 SPSGQPPHYLKKSPSPTG---GKQMGLLSPMQDQSTSPIAQPNVKYSEEG-DGPAQ--------- 117
                         .|.||   .|: .:...::|.|.....:..||.|... |.||:         
 Frog   103 -------------SSVTGINCDKE-AMADKLKDASNLGFLEAAVKISHTSPDIPAEVQMSMKEHL 153

  Fly   118 ----HAEQQNGNQLTVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNG-------KEL 171
                ..::|.....:.......|..|:..:|   |.::..|:.|:.:.:...:.|       |:.
 Frog   154 MRRTRIQRQTTEPASSTRHTSFKRHLNRQMH---VCSVDFGTDTLQVTEQPTSIGRIKPELYKQK 215

  Fly   172 TV------TDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKG--GSSGTGDIPTGMNGRTQA 228
            :|      .|.....|.|.|.|:|..|...|:|.|::...||.|.  |||               
 Frog   216 SVDSEDIKKDDAKTCGKINFTLKYDYEIETLIVRILKAFDLPAKDFCGSS--------------- 265

  Fly   229 ATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDV 293
              |||||:.||||::.|.:|||.|.|.||.:||.|.| .:..:||.|..||..:..|||:||.|:
 Frog   266 --DPYVKIYLLPDRKRKFQTRVHRKTLNPTFDESFHF-PVPYDDLPNRKLHLSVFDFDRFSRHDM 327

  Fly   294 IGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNL 358
            ||||:.. ...|..|:|:|: ||.|:||..:.:  :...||::.|||:.|.|||||:.::|.|||
 Frog   328 IGEVILE-NLFEESDLSRES-SIWKDIQYATTE--SVDLGEIMFSLCYLPTAGRLTLTVIKCRNL 388

  Fly   359 PRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLEL 423
            ..||:||.:|||||:.||.:|:|:.||||.:||.||:|.:||:..||||.     .:::.|||.:
 Frog   389 KAMDITGYSDPYVKVSLLCDGRRLKKKKTTIKKNTLNPTYNEAIIFDIPP-----ENMDQVSLLI 448

  Fly   424 MLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLNE 474
            .::|:|||..||:||...:|. ::.....:||||:...||:.|..||.|.|
 Frog   449 SVMDYDRVGHNEIIGVCRVGN-STEGLGRDHWNEMLAYPRKPITHWHPLVE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 59/144 (41%)
C2B_Synaptotagmin-4 332..473 CDD:176049 64/140 (46%)
syt6XP_002935822.2 COG5038 <90..>331 CDD:227371 76/284 (27%)
C2A_Synaptotagmin-1-5-6-9-10 229..354 CDD:176031 59/144 (41%)
C2B_Synaptotagmin-3-5-6-9-10 363..496 CDD:176048 64/138 (46%)

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