DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and LOC100486361

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_002931826.4 Gene:LOC100486361 / 100486361 XenbaseID:XB-GENE-29078307 Length:959 Species:Xenopus tropicalis


Alignment Length:553 Identity:122/553 - (22%)
Similarity:207/553 - (37%) Gaps:175/553 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RNKKQSQHDASFPFQPTRRPTAVR--------SPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQST 98
            |:.|:|:       .|.|.|:..:        ||..:.|:.          .|:...| .:::|.
 Frog   440 RSSKRSK-------LPVRLPSVSKETKVDVPLSPRDKLPNV----------SQLETAS-CKEESV 486

  Fly    99 SPIAQPNVK---YS-------------EEG-----------DGPAQHA--EQQNGNQLTVVDGN- 133
            :|..:|.||   ||             |:|           :...:||  |.::|..|   ||| 
 Frog   487 TPEIKPEVKGTPYSNVQILIDTVTSDEEQGATASVKAAQRSEDVVEHATCESEDGKSL---DGNV 548

  Fly   134 ---------GL--KHSLHN------------SLHH-------------------SPVETIANGSV 156
                     |:  ..||.|            :|.|                   |..|:.....:
 Frog   549 DSNPTSQAIGVTSARSLVNIYTSTETYNKPQTLSHQLLEPERAKELSRSTPALLSETESDTASEI 613

  Fly   157 TITLDDHSLTNGKELTVTD-----------------QYGKL---GTIYFKLRYLAERNALMVSII 201
            :..|..|..|:..:...:|                 .:|.:   |.:.|.|.|..:.....:|:.
 Frog   614 SFQLKRHRKTHSSDSNSSDMASVSSVSNSVLSVYSGDFGSVDAQGAVEFSLDYDEKNREFQISVS 678

  Fly   202 RCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQH--KVKTRVVRNTRNPVYDEDFT 264
            :|:.|.          |.....||    :|||||..|||||..  |.||.|.|.|.||||:|...
 Frog   679 QCKDLA----------IVDEKKGR----SDPYVKTYLLPDKARMGKRKTSVKRRTTNPVYNEVLR 729

  Fly   265 FYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIR- 328
             |.:....|....|:..:...|...|:..:||:...|||.:..:..    |....::|||:... 
 Frog   730 -YKIEKMVLLIQKLNLSVWHNDPLGRNSFLGEMEIDLTSWDWSNTK----SNWYPLKPRSVSAMN 789

  Fly   329 -AQGRGELLISLCW---------QPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIA 383
             ....|.:.:|:.:         .|.:|.:.:.:...::||::..:|: |.:||.|:|.:..:.:
 Frog   790 GVDHLGVMNLSIKYIPPGSLGPKHPTSGEVHIWVKDTKDLPQLRPSGV-DSFVKCYVLPDTSKKS 853

  Fly   384 KKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELG----- 443
            .:||.|.|:..:||||.:..:|....|    .|....:||.:.|.:::: |..:|.:.||     
 Frog   854 YQKTRVIKKDSNPVFNHTIVYDGFHTE----DLRDACVELTVWDHEKLS-NHFLGGIRLGLGTGF 913

  Fly   444 -------GPNSSSTALNHWNEVCNSPRRQIAEW 469
                   ..:|:...:..|.|:.::|.    ||
 Frog   914 SYGIAVDWMDSTQEEVAFWQEMMSTPN----EW 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 42/147 (29%)
C2B_Synaptotagmin-4 332..473 CDD:176049 36/159 (23%)
LOC100486361XP_002931826.4 PHD_SF 13..>68 CDD:473978
C2A_SLP-1_2 657..781 CDD:176039 42/142 (30%)
C2B_SLP_1-2-3-4 795..950 CDD:175987 36/158 (23%)
Blue background indicates that the domain is not in the aligned region.

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