DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and tc2n

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_002933250.4 Gene:tc2n / 100485673 XenbaseID:XB-GENE-983033 Length:487 Species:Xenopus tropicalis


Alignment Length:501 Identity:107/501 - (21%)
Similarity:182/501 - (36%) Gaps:102/501 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RNKKQSQHDASFPFQ--------PTRRPTAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQS- 97
            :.|..::.|.|.|.:        |.....:|:...|....|| .|..|:.|:::..:.|...|| 
 Frog    18 KGKALNEEDGSNPTRKGSHIVDLPPMSSVSVKKQVGCTEDYL-LSKLPSDGREVPFIVPTFKQSY 81

  Fly    98 TSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHS-LHNS---LHHSPVETIANGSVTI 158
            ..|.|..|....|...|.|:........:|:.:....|.:. ::|.   |.|...:.|..|.  :
 Frog    82 IQPKASANPGQLEGLKGSARATFTDRKTELSAMYQQDLNYDVVYNPGYVLQHVSPDMIRRGK--L 144

  Fly   159 TLDD----HSLTNGKELTVTDQYGKLGTIY----------------------------------- 184
            ..|.    .|:.:.:...|||..|..||:|                                   
 Frog   145 KTDPVRLYGSVCDLRSNKVTDSPGVTGTLYDFNGSPRNIQRYDSVSSIRSSNSSRKDSQGSNRSL 209

  Fly   185 ----------------FKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPY 233
                            |||||:.....:.:::::.:.|        :..:..|.|      ...|
 Frog   210 DTITLSGDEKDFGRLNFKLRYIVAVEQIWITVVKIKDL--------SWPVSCGEN------PSIY 260

  Fly   234 VKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVV 298
            :|..:...|....|:.....:.:..:.|.|.| .:....||...|.|.:||.....|       .
 Frog   261 IKGIITLPKAVPFKSSAKEGSLDTEFMETFVF-AIKHQSLQASRLVFKVLSLTPRKR-------T 317

  Fly   299 CPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDV 363
            ....||.:.|:|:|......|:.|.|.....|  .||.:..|:|....|:.:.:|||:|||....
 Frog   318 ISHCSISLRDLSEEETDHWLELVPSSKVTVCQ--AELQVGTCFQAINSRIQLQILKAQNLPNSST 380

  Fly   364 TGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPV-FNESFAFDIPAAEGAGASLEGVSLELMLLD 427
            ....:.:||:.:......:.||||.:.|.|...| :.|:..|.:...|      ||::..:.|..
 Frog   381 PLSINFFVKVEMFSTEGLLYKKKTRLLKVTNGQVNWGETMIFPVTLKE------EGINFLIKLYS 439

  Fly   428 WDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLN 473
            ...|.:...||::.:...::||.|.:.|.:....|.:.:.:|||||
 Frog   440 RSSVRRKHFIGQVWISSDSNSSEAADQWTDTIQHPEKVVTKWHKLN 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 31/193 (16%)
C2B_Synaptotagmin-4 332..473 CDD:176049 37/141 (26%)
tc2nXP_002933250.4 C2A_Tac2-N 237..339 CDD:176066 22/123 (18%)
C2B_Tac2-N 350..484 CDD:176074 36/139 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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