DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt17

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001096478.1 Gene:syt17 / 100125097 XenbaseID:XB-GENE-949409 Length:474 Species:Xenopus tropicalis


Alignment Length:319 Identity:115/319 - (36%)
Similarity:177/319 - (55%) Gaps:38/319 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 DDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGR 225
            |..|||:.:.||   :| :||.::|..:|....|.|.|.:|..|.||          .|...:|.
 Frog   170 DVDSLTDDEILT---KY-QLGMLHFSTQYDLLHNYLNVRVIEARDLP----------PPISYDGS 220

  Fly   226 TQ--AATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRY 288
            .|  |.::||||:.||||:::..:|.|.|.|:|||::|.:|| .:...:.|..:|...|:.||::
 Frog   221 RQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQNPVFEERYTF-EIQFLEAQRRTLLLTIVDFDKF 284

  Fly   289 SRDDVIGEVVCPLTSIEI---GDISKEAL-SISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLT 349
            ||..|||:|..||..:::   |...|..: |...|::          .||||:||.:.|:||||.
 Frog   285 SRHCVIGKVAMPLNEVDLVKGGHWWKAIIPSSQNEVE----------LGELLLSLNYLPSAGRLN 339

  Fly   350 VVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAK-KKTHVKKRTLSPVFNESFAFDIPAAEGAG 413
            |.:::|:.|.:.|::..:||:|||.|:: |.::|| |||...:.|:.|.:||||:|.:|..|   
 Frog   340 VDIIRAKQLLQTDMSQGSDPFVKIQLVH-GLKLAKTKKTSCMRGTIDPFYNESFSFKVPQEE--- 400

  Fly   414 ASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
              ||.|||...:...:..|.|:.|||:.:|...|.|...|||..:.||.|..:.:||.|
 Frog   401 --LENVSLVFTVYGHNMKTSNDFIGRIVIGQYASGSPESNHWRRMLNSNRTAVEQWHSL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 50/148 (34%)
C2B_Synaptotagmin-4 332..473 CDD:176049 58/142 (41%)
syt17NP_001096478.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..112
C2A_Synaptotagmin-15-17 186..314 CDD:176036 47/138 (34%)
C2B_Synaptotagmin-17 323..457 CDD:176055 57/139 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X61
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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